RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 ERVV-2B6SEH9 535 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 PDE8AO60658 829 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 MYCP01106 439 aaPredicted RBP7.45□□□□□ -1.22
BRIP1-201ENST00000259008 ME1P48163 572 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 R3HDM1Q15032 1099 aaKnown RBP7.45□□□□□ -1.22
BRIP1-201ENST00000259008 DRC1Q96MC2 740 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 MEIS3Q99687 375 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 ASAP1Q9ULH1 1129 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 GUCY1B3Q02153 619 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 SSRP1Q08945 709 aaKnown RBP7.45□□□□□ -1.22
BRIP1-201ENST00000259008 MKRN3Q13064 507 aaKnown RBP7.45□□□□□ -1.22
BRIP1-201ENST00000259008 ADGRL3Q9HAR2 1447 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 SEPT11Q9NVA2 429 aaKnown RBP7.45□□□□□ -1.22
BRIP1-201ENST00000259008 ARAP3Q8WWN8 1544 aa7.45□□□□□ -1.22
BRIP1-201ENST00000259008 FIBPO43427 364 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 IL15P40933 162 aaPredicted RBP7.44□□□□□ -1.22
BRIP1-201ENST00000259008 CCT2P78371 535 aaKnown RBP7.44□□□□□ -1.22
BRIP1-201ENST00000259008 NLGN1Q8N2Q7 840 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 SP4Q02446 784 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 RSPH6AQ9H0K4 717 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 KIF1BO60333 1816 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 LARP1BQ659C4 914 aaKnown RBP7.44□□□□□ -1.22
BRIP1-201ENST00000259008 TTLL5Q6EMB2 1281 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 TSPYL6Q8N831 410 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 EVI5LQ96CN4 794 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 ECHDC1Q9NTX5 307 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 RIMS1Q86UR5 1692 aaKnown RBP7.44□□□□□ -1.22
BRIP1-201ENST00000259008 MAP3K4Q9Y6R4 1608 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 CLTCQ00610 1675 aaKnown RBP7.44□□□□□ -1.22
BRIP1-201ENST00000259008 DLGAP5Q15398 846 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 DALRD3Q5D0E6 543 aaKnown RBP7.44□□□□□ -1.22
BRIP1-201ENST00000259008 TEX11Q8IYF3 940 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 GJD4Q96KN9 370 aaPredicted RBP7.44□□□□□ -1.22
BRIP1-201ENST00000259008 CARD10Q9BWT7 1032 aa7.44□□□□□ -1.22
BRIP1-201ENST00000259008 IL13P35225 146 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 C20orf194Q5TEA3 1177 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 ZNF496Q96IT1 587 aaPredicted RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 ADGRL2O95490 1459 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 TCP10L2B9ZVM9 353 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 KINO60870 393 aaKnown RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 TRIM21P19474 475 aaKnown RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 KIF22Q14807 665 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 ARHGEF12Q9NZN5 1544 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 CCDC194A0A1B0GVG4 234 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 PLEKHG3A1L390 1219 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 ALDH1L1O75891 902 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 GTF2IP78347 998 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 IFIT1BQ5T764 474 aaKnown RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 MICU3Q86XE3 530 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 SULF1Q8IWU6 871 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 SMCR8Q8TEV9 937 aaPredicted RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 WDR70Q9NW82 654 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 PPEF1O14829 653 aaPredicted RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 KIF5BP33176 963 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 DENND2AQ9ULE3 1009 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 BAG4O95429 457 aaKnown RBP7.43□□□□□ -1.22
BRIP1-201ENST00000259008 PLCG2P16885 1265 aa7.43□□□□□ -1.22
BRIP1-201ENST00000259008 PDCP20941 246 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 NUCB2P80303 420 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 HEATR3Q7Z4Q2 680 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 JMYQ8N9B5 988 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 ARID3AQ99856 593 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 IVNS1ABPQ9Y6Y0 642 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 CCDC196A0A1B0GTZ2 297 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 SERPINB2P05120 415 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 SCNN1DP51172 638 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 MAP3K9P80192 1104 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 RABEP1Q15276 862 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 CCDC83Q8IWF9 413 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 SMARCC2Q8TAQ2 1214 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 NOD1Q9Y239 953 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 JCADQ9P266 1359 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 KCNQ3O43525 872 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 GADL1Q6ZQY3 521 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 CEP57L1Q8IYX8 460 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 LINS1Q8NG48 757 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 RHPN1Q8TCX5 695 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 CNKSR1Q969H4 720 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 DDX21Q9NR30 783 aaKnown RBP eCLIP7.42□□□□□ -1.22
BRIP1-201ENST00000259008 ZBTB21Q9ULJ3 1066 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 CSADQ9Y600 493 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 A2ML1A8K2U0 1454 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 SBNO2Q9Y2G9 1366 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 MRPL50Q8N5N7 158 aaKnown RBP7.42□□□□□ -1.22
BRIP1-201ENST00000259008 KLHDC4Q8TBB5 520 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 ZNF592Q92610 1267 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 METTL22Q9BUU2 404 aaPredicted RBP7.42□□□□□ -1.22
BRIP1-201ENST00000259008 PAG1Q9NWQ8 432 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 WDR17Q8IZU2 1322 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 SHROOM2Q13796 1616 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 NEBLO76041 1014 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 TMEM266Q2M3C6 531 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 AATFQ9NY61 560 aaKnown RBP eCLIP7.42□□□□□ -1.22
BRIP1-201ENST00000259008 PKD2L1Q9P0L9 805 aa7.42□□□□□ -1.22
BRIP1-201ENST00000259008 SRP68Q9UHB9 627 aaKnown RBP7.42□□□□□ -1.22
BRIP1-201ENST00000259008 STIM1Q13586 685 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 PAGR1Q9BTK6 254 aa7.41□□□□□ -1.22
BRIP1-201ENST00000259008 CALM1P0DP23 149 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms