RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 HARSP12081 509 aaKnown RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 CWC27Q6UX04 472 aaKnown RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 CLEC17AQ6ZS10 378 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 NACC2Q96BF6 587 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 AK7Q96M32 723 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 TRMT1Q9NXH9 659 aaKnown RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 WWC3Q9ULE0 1092 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 KDM2BQ8NHM5 1336 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 A0A1B0GUA9 196 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 HNRNPH1P31943 449 aaKnown RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 ACTN2P35609 894 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 ZNF132P52740 706 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 NAA30Q147X3 362 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 KIF4BQ2VIQ3 1234 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 CENPQQ7L2Z9 268 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 NBPF15Q8N660 670 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 FAM81AQ8TBF8 368 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 KLF15Q9UIH9 416 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 MAGI1Q96QZ7 1491 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-201ENST00000258733 EIF3FO00303 357 aaPredicted RBP8.96□□□□□ -0.97
GPNMB-201ENST00000258733 PARNO95453 639 aaKnown RBP8.96□□□□□ -0.97
GPNMB-201ENST00000258733 POU5F1Q01860 360 aaKnown RBP8.96□□□□□ -0.97
GPNMB-201ENST00000258733 SLFNL1Q499Z3 407 aa8.96□□□□□ -0.97
GPNMB-201ENST00000258733 SDCCAG8Q86SQ7 713 aaPredicted RBP8.96□□□□□ -0.97
GPNMB-201ENST00000258733 ADGRL1O94910 1474 aa8.96□□□□□ -0.97
GPNMB-201ENST00000258733 ABCC10Q5T3U5 1492 aa8.96□□□□□ -0.97
GPNMB-201ENST00000258733 NLRP1Q9C000 1473 aa8.96□□□□□ -0.97
GPNMB-201ENST00000258733 SMTNL1A8MU46 457 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 ENPP1P22413 925 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 IL4RP24394 825 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 ADCY1Q08828 1119 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 SCRN1Q12765 414 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 PACS1Q6VY07 963 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 IGSF5Q9NSI5 407 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 HDAC6Q9UBN7 1215 aa8.96□□□□□ -0.98
GPNMB-201ENST00000258733 A0A087WUV0 522 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-201ENST00000258733 FBXO38Q6PIJ6 1188 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 ATP11CQ8NB49 1132 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 SPDYE1Q8NFV5 336 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-201ENST00000258733 HDAC7Q8WUI4 952 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 EXOC4Q96A65 974 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 SAAL1Q96ER3 474 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 PDRG1Q9NUG6 133 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 DNMBPQ6XZF7 1577 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 SYNJ2O15056 1496 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 POLR3GO15318 223 aaPredicted RBP8.95□□□□□ -0.98
GPNMB-201ENST00000258733 FOSL1P15407 271 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 GPTP24298 496 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 GIMAP6Q6P9H5 292 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 USP33Q8TEY7 942 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 TCP11Q8WWU5 503 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 SENP2Q9HC62 589 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 TMEM63CQ9P1W3 806 aa8.95□□□□□ -0.98
GPNMB-201ENST00000258733 TFIP11Q9UBB9 837 aaKnown RBP8.95□□□□□ -0.98
GPNMB-201ENST00000258733 BICDL2A1A5D9 508 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 RGL2O15211 777 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 HOXD10P28358 340 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 PSD3Q9NYI0 1048 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 RGL1Q9NZL6 768 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 ODF2LQ9ULJ1 636 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 DHX29Q7Z478 1369 aaKnown RBP8.94□□□□□ -0.98
GPNMB-201ENST00000258733 TMEM62Q0P6H9 643 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 KRT72Q14CN4 511 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 POSTNQ15063 836 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 ZSCAN23Q3MJ62 389 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 KBTBD12Q3ZCT8 623 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 PLEKHO1Q53GL0 409 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-201ENST00000258733 MIPOL1Q8TD10 442 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 ABCA10Q8WWZ4 1543 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 CCDC194A0A1B0GVG4 234 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 KIF2AO00139 706 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-201ENST00000258733 OPA1O60313 960 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 ARHGAP27Q6ZUM4 889 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 KIAA1328Q86T90 577 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 CCDC114Q96M63 670 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 EPAS1Q99814 870 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 CDCA7Q9BWT1 371 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-201ENST00000258733 HOMER3Q9NSC5 361 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 ROCK1Q13464 1354 aa8.94□□□□□ -0.98
GPNMB-201ENST00000258733 LRRC9Q6ZRR7 1453 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 ERLIN1O75477 346 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 OLFML1Q6UWY5 402 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 TMC6Q7Z403 805 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 SLC39A3Q9BRY0 314 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 HOXC10Q9NYD6 342 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 CLIP2Q9UDT6 1046 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 CCNB3Q8WWL7 1395 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 PPFIA3O75145 1194 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 SCNN1BP51168 640 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 COL19A1Q14993 1142 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.93□□□□□ -0.98
GPNMB-201ENST00000258733 CDCA2Q69YH5 1023 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-201ENST00000258733 MTHFD1LQ6UB35 978 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 MICALCLQ6ZW33 695 aa8.93□□□□□ -0.98
GPNMB-201ENST00000258733 UBE2Q1Q7Z7E8 422 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms