RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 PDRG1Q9NUG6 133 aa17.54■□□□□ 0.4
TRAFD1-201ENST00000257604 KDM3BQ7LBC6 1761 aa17.54■□□□□ 0.4
TRAFD1-201ENST00000257604 VPS37CA5D8V6 355 aaPredicted RBP17.54■□□□□ 0.4
TRAFD1-201ENST00000257604 DDB1Q16531 1140 aa17.54■□□□□ 0.4
TRAFD1-201ENST00000257604 SKOR2Q2VWA4 1001 aaPredicted RBP17.54■□□□□ 0.4
TRAFD1-201ENST00000257604 RRP9O43818 475 aaKnown RBP17.53■□□□□ 0.4
TRAFD1-201ENST00000257604 HCLS1P14317 486 aaPredicted RBP17.53■□□□□ 0.4
TRAFD1-201ENST00000257604 WASHC4Q2M389 1173 aa17.53■□□□□ 0.4
TRAFD1-201ENST00000257604 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
TRAFD1-201ENST00000257604 FOXO4P98177 505 aa17.53■□□□□ 0.4
TRAFD1-201ENST00000257604 KCNQ2O43526 872 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 ADORA1P30542 326 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 RFX5P48382 616 aaPredicted RBP17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 CHST3Q7LGC8 479 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 FERMT3Q86UX7 667 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 CNNM1Q9NRU3 951 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 ZDHHC9Q9Y397 364 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 CACNA1FO60840 1977 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 HSP90B1P14625 803 aaKnown RBP17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 ATP6V1AP38606 617 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 FAM98CQ17RN3 349 aaKnown RBP17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
TRAFD1-201ENST00000257604 A0A1B0GUL7 405 aa17.52■□□□□ 0.39
TRAFD1-201ENST00000257604 CREB3L3Q68CJ9 461 aa17.52■□□□□ 0.39
TRAFD1-201ENST00000257604 STK11IPQ8N1F8 1099 aa17.52■□□□□ 0.39
TRAFD1-201ENST00000257604 CCDC24Q8N4L8 307 aa17.52■□□□□ 0.39
TRAFD1-201ENST00000257604 CYP46A1Q9Y6A2 500 aa17.52■□□□□ 0.39
TRAFD1-201ENST00000257604 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
TRAFD1-201ENST00000257604 SMC3Q9UQE7 1217 aa17.51■□□□□ 0.39
TRAFD1-201ENST00000257604 AOX1Q06278 1338 aa17.51■□□□□ 0.39
TRAFD1-201ENST00000257604 CCDC171Q6TFL3 1326 aa17.51■□□□□ 0.39
TRAFD1-201ENST00000257604 KDM4AO75164 1064 aa17.51■□□□□ 0.39
TRAFD1-201ENST00000257604 MSNP26038 577 aaKnown RBP17.51■□□□□ 0.39
TRAFD1-201ENST00000257604 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
TRAFD1-201ENST00000257604 H7C1W4 665 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 IFIT5Q13325 482 aaKnown RBP17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 RUFY3Q7L099 469 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 NGLY1Q96IV0 654 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 ISY1Q9ULR0 285 aaKnown RBP17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 METTL24Q5JXM2 366 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 UTYO14607 1347 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 HAND2P61296 217 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 CCDC191Q8NCU4 936 aa17.5■□□□□ 0.39
TRAFD1-201ENST00000257604 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
TRAFD1-201ENST00000257604 VPS53Q5VIR6 699 aa17.49■□□□□ 0.39
TRAFD1-201ENST00000257604 TTC39AQ5SRH9 613 aa17.49■□□□□ 0.39
TRAFD1-201ENST00000257604 RAB11FIP4Q86YS3 637 aa17.49■□□□□ 0.39
TRAFD1-201ENST00000257604 GREM2Q9H772 168 aa17.49■□□□□ 0.39
TRAFD1-201ENST00000257604 PHRF1Q9P1Y6 1649 aaKnown RBP17.49■□□□□ 0.39
TRAFD1-201ENST00000257604 A0A0G2JLW4 131 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 FIBPO43427 364 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 CCDC173Q0VFZ6 552 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 NSFL1CQ9UNZ2 370 aaKnown RBP17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 IQSEC3Q9UPP2 1182 aaPredicted RBP17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 EYA2O00167 538 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 ATG9AQ7Z3C6 839 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 UBAP1LF5GYI3 381 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 SLC27A2O14975 620 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 CASP7P55210 303 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 ANAPC15P60006 121 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 FAM173BQ6P4H8 233 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
TRAFD1-201ENST00000257604 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 BLOC1S2Q6QNY1 142 aa17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 DDX11Q96FC9 970 aa17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 RBSNQ9H1K0 784 aa17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 C5P01031 1676 aa17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 IRS4O14654 1257 aaPredicted RBP17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 AEBP2Q6ZN18 517 aaPredicted RBP17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 PAG1Q9NWQ8 432 aa17.47■□□□□ 0.39
TRAFD1-201ENST00000257604 TAF5LO75529 589 aa17.46■□□□□ 0.39
TRAFD1-201ENST00000257604 ITGA6P23229 1130 aa17.46■□□□□ 0.39
TRAFD1-201ENST00000257604 ZSCAN30Q86W11 494 aa17.46■□□□□ 0.39
TRAFD1-201ENST00000257604 MCM2P49736 904 aa17.46■□□□□ 0.39
TRAFD1-201ENST00000257604 NKX1-1Q15270 411 aaPredicted RBP17.46■□□□□ 0.39
TRAFD1-201ENST00000257604 ZSCAN23Q3MJ62 389 aa17.46■□□□□ 0.39
TRAFD1-201ENST00000257604 GJB2P29033 226 aa17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 GTF2E1P29083 439 aaPredicted RBP17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 IL15P40933 162 aaPredicted RBP17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 RABL6Q3YEC7 729 aaPredicted RBP17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 TTLL5Q6EMB2 1281 aa17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 SYCE3A1L190 88 aa17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 APPP05067 770 aa17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 ATP5JP18859 108 aa17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 SCARF1Q14162 830 aa17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 COL18A1P39060 1754 aa17.45■□□□□ 0.38
TRAFD1-201ENST00000257604 NPHP1O15259 732 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 IDH1O75874 414 aaKnown RBP17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 ME3Q16798 604 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 PTF1AQ7RTS3 328 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 XAGE2Q96GT9 111 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 STRCQ7RTU9 1775 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 CCDC158Q5M9N0 1113 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms