RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 CCDC85AQ96PX6 553 aaPredicted RBP15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 ARHGEF10LQ9HCE6 1279 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 PDRG1Q9NUG6 133 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 NCAPD2Q15021 1401 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 BCAR3O75815 825 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 BRINP3Q76B58 766 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 PRKCSHP14314 528 aaPredicted RBP15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 DCTN1Q14203 1278 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 RTL9Q8NET4 1388 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 NCBP1Q09161 790 aaKnown RBP15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 ERMNQ8TAM6 284 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 SMARCE1Q969G3 411 aa15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 METTL22Q9BUU2 404 aaPredicted RBP15.69■□□□□ 0.1
PRPF38A-201ENST00000257181 KINO60870 393 aaKnown RBP15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 TSPY2A6NKD2 308 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 UFL1O94874 794 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 USP48Q86UV5 1035 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 RTKN2Q8IZC4 609 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 USP6P35125 1406 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 DCCP43146 1447 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 PARD3Q8TEW0 1356 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 MBD3O95983 291 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 PDE4AP27815 886 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 TTC41PQ6P2S7 1318 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 GRIN3BO60391 1043 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 C2CD5Q86YS7 1000 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 TMEM57Q8N5G2 664 aa15.68■□□□□ 0.1
PRPF38A-201ENST00000257181 VSIG10Q8N0Z9 540 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 RANBP6O60518 1105 aaKnown RBP15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 SSH1Q8WYL5 1049 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 PHKG2P15735 406 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 PUM3Q15397 648 aaKnown RBP15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 PRDM15P57071 1507 aaPredicted RBP15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 NT5C2P49902 561 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 DCPSQ96C86 337 aaKnown RBP15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 VEZTQ9HBM0 779 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 WDR33Q9C0J8 1336 aaKnown RBP15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 UNC13BO14795 1591 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 TSPY3P0CV98 308 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 TSPY8P0CW00 308 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 CYP7A1P22680 504 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 USP37Q86T82 979 aa15.67■□□□□ 0.1
PRPF38A-201ENST00000257181 MAGEB6P1A0A0J9YX57 407 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 ATP5J2-PTCD1G3V325 749 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 DKC1O60832 514 aaKnown RBP eCLIP15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 HIBADHP31937 336 aaKnown RBP15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 IL6STP40189 918 aaPredicted RBP15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 ARHGEF25Q86VW2 580 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 NCOA7Q8NI08 942 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 FERMT2Q96AC1 680 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 KIAA0232Q92628 1395 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 CCP110O43303 1012 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 IL13P35225 146 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 SSRP1Q08945 709 aaKnown RBP15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 MCTP2Q6DN12 878 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 IPO9Q96P70 1041 aaKnown RBP15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 METP08581 1390 aa15.66■□□□□ 0.1
PRPF38A-201ENST00000257181 PLA2R1Q13018 1463 aa15.65■□□□□ 0.1
PRPF38A-201ENST00000257181 IVNS1ABPQ9Y6Y0 642 aa15.65■□□□□ 0.1
PRPF38A-201ENST00000257181 AMPD3Q01432 767 aa15.65■□□□□ 0.1
PRPF38A-201ENST00000257181 CSADQ9Y600 493 aa15.65■□□□□ 0.1
PRPF38A-201ENST00000257181 CCDC194A0A1B0GVG4 234 aa15.65■□□□□ 0.1
PRPF38A-201ENST00000257181 TESK2Q96S53 571 aa15.65■□□□□ 0.1
PRPF38A-201ENST00000257181 RAD50Q92878 1312 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 MATR3P43243 847 aaKnown RBP eCLIP15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 VPS72Q15906 364 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 SDF4Q9BRK5 362 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 A0A0U1RQG5 324 aaPredicted RBP15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 SLC39A6Q13433 755 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 CEP57L1Q8IYX8 460 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 FRMPD1Q5SYB0 1578 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 CCDC93Q567U6 631 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 RSPH6AQ9H0K4 717 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 DIP2CQ9Y2E4 1556 aa15.64■□□□□ 0.09
PRPF38A-201ENST00000257181 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 TSG101Q99816 390 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 BCS1LQ9Y276 419 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 GOLGA6L3A6NEY3 463 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 ARHGAP27Q6ZUM4 889 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 FBXO41Q8TF61 875 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 DDX49Q9Y6V7 483 aaKnown RBP15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 CDC42BPAQ5VT25 1732 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 IFIT3O14879 490 aaKnown RBP15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 SEMA3EO15041 775 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 BBOX1O75936 387 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 ATP8B2P98198 1209 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 NEK4P51957 841 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 DLGAP5Q15398 846 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 THUMPD2Q9BTF0 503 aaKnown RBP15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 C1orf115Q9H7X2 142 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 PLEKHG2Q9H7P9 1386 aa15.63■□□□□ 0.09
PRPF38A-201ENST00000257181 DALRD3Q5D0E6 543 aaKnown RBP15.62■□□□□ 0.09
PRPF38A-201ENST00000257181 RNF17Q9BXT8 1623 aaKnown RBP15.62■□□□□ 0.09
PRPF38A-201ENST00000257181 TULP4Q9NRJ4 1543 aa15.62■□□□□ 0.09
PRPF38A-201ENST00000257181 SPC25Q9HBM1 224 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms