RNA–Protein interactions for RNA: ENST00000252487.9

TOMM40-201, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOMM40, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-201ENST00000252487 NRXN2Q9P2S2 1712 aa32.49■■■□□ 2.79
TOMM40-201ENST00000252487 ZBTB7AO95365 584 aa32.48■■■□□ 2.79
TOMM40-201ENST00000252487 CSF1RP07333 972 aa32.48■■■□□ 2.79
TOMM40-201ENST00000252487 GREM2Q9H772 168 aa32.48■■■□□ 2.79
TOMM40-201ENST00000252487 EXOC6BQ9Y2D4 811 aa32.48■■■□□ 2.79
TOMM40-201ENST00000252487 PARP3Q9Y6F1 533 aa32.48■■■□□ 2.79
TOMM40-201ENST00000252487 RFX5P48382 616 aaPredicted RBP32.47■■■□□ 2.79
TOMM40-201ENST00000252487 SLC10A5Q5PT55 438 aa32.47■■■□□ 2.79
TOMM40-201ENST00000252487 APBB1O00213 710 aa32.46■■■□□ 2.79
TOMM40-201ENST00000252487 SKAP1Q86WV1 359 aa32.46■■■□□ 2.79
TOMM40-201ENST00000252487 ZNF594Q96JF6 807 aaPredicted RBP32.46■■■□□ 2.79
TOMM40-201ENST00000252487 DCTPP1Q9H773 170 aa32.46■■■□□ 2.79
TOMM40-201ENST00000252487 COL4A1P02462 1669 aa32.44■■■□□ 2.78
TOMM40-201ENST00000252487 SIL1Q9H173 461 aa32.44■■■□□ 2.78
TOMM40-201ENST00000252487 ANKRD31Q8N7Z5 1873 aa32.44■■■□□ 2.78
TOMM40-201ENST00000252487 ST5P78524 1137 aa32.43■■■□□ 2.78
TOMM40-201ENST00000252487 SMC5Q8IY18 1101 aa32.43■■■□□ 2.78
TOMM40-201ENST00000252487 SLC16A10Q8TF71 515 aa32.43■■■□□ 2.78
TOMM40-201ENST00000252487 TAF1P21675 1872 aa32.43■■■□□ 2.78
TOMM40-201ENST00000252487 SURF6O75683 361 aaKnown RBP32.43■■■□□ 2.78
TOMM40-201ENST00000252487 ITGA6P23229 1130 aa32.42■■■□□ 2.78
TOMM40-201ENST00000252487 PTPN12Q05209 780 aaKnown RBP32.42■■■□□ 2.78
TOMM40-201ENST00000252487 SEC31BQ9NQW1 1179 aa32.42■■■□□ 2.78
TOMM40-201ENST00000252487 ATF5Q9Y2D1 282 aaPredicted RBP32.42■■■□□ 2.78
TOMM40-201ENST00000252487 HSP90B1P14625 803 aaKnown RBP32.41■■■□□ 2.78
TOMM40-201ENST00000252487 BCL11AQ9H165 835 aa32.41■■■□□ 2.78
TOMM40-201ENST00000252487 CCDC57Q2TAC2 916 aa32.4■■■□□ 2.78
TOMM40-201ENST00000252487 NLRP3Q96P20 1036 aa32.4■■■□□ 2.78
TOMM40-201ENST00000252487 IFIT5Q13325 482 aaKnown RBP32.4■■■□□ 2.78
TOMM40-201ENST00000252487 CCDC152Q4G0S7 254 aa32.4■■■□□ 2.78
TOMM40-201ENST00000252487 GCC1Q96CN9 775 aa32.4■■■□□ 2.78
TOMM40-201ENST00000252487 SPEF2Q9C093 1822 aa32.39■■■□□ 2.78
TOMM40-201ENST00000252487 SF3B3Q15393 1217 aaKnown RBP32.38■■■□□ 2.77
TOMM40-201ENST00000252487 COPRSQ9NQ92 184 aa32.37■■■□□ 2.77
TOMM40-201ENST00000252487 PDZRN3Q9UPQ7 1066 aa32.37■■■□□ 2.77
TOMM40-201ENST00000252487 SMARCA5O60264 1052 aaPredicted RBP32.37■■■□□ 2.77
TOMM40-201ENST00000252487 RIC1Q4ADV7 1423 aa32.37■■■□□ 2.77
TOMM40-201ENST00000252487 ANKRD18BA2A2Z9 1011 aa32.36■■■□□ 2.77
TOMM40-201ENST00000252487 OS9Q13438 667 aaPredicted RBP32.36■■■□□ 2.77
TOMM40-201ENST00000252487 ANKRD45Q5TZF3 282 aa32.36■■■□□ 2.77
TOMM40-201ENST00000252487 PUS3Q9BZE2 481 aaKnown RBP32.36■■■□□ 2.77
TOMM40-201ENST00000252487 MTFR1LQ9H019 292 aa32.36■■■□□ 2.77
TOMM40-201ENST00000252487 NOP58Q9Y2X3 529 aaKnown RBP32.36■■■□□ 2.77
TOMM40-201ENST00000252487 TAF7LQ5H9L4 462 aa32.35■■■□□ 2.77
TOMM40-201ENST00000252487 LRRC24Q50LG9 513 aa32.34■■■□□ 2.77
TOMM40-201ENST00000252487 RTL9Q8NET4 1388 aa32.34■■■□□ 2.77
TOMM40-201ENST00000252487 COL11A2P13942 1736 aaPredicted RBP32.33■■■□□ 2.77
TOMM40-201ENST00000252487 NUCB1Q02818 461 aa32.32■■■□□ 2.76
TOMM40-201ENST00000252487 LNPKQ9C0E8 428 aa32.32■■■□□ 2.76
TOMM40-201ENST00000252487 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.32■■■□□ 2.76
TOMM40-201ENST00000252487 G3BP1Q13283 466 aaKnown RBP eCLIP32.31■■■□□ 2.76
TOMM40-201ENST00000252487 BRIP1Q9BX63 1249 aa32.31■■■□□ 2.76
TOMM40-201ENST00000252487 LRP5O75197 1615 aa32.31■■■□□ 2.76
TOMM40-201ENST00000252487 ATG9AQ7Z3C6 839 aa32.3■■■□□ 2.76
TOMM40-201ENST00000252487 CELF1Q92879 486 aaKnown RBP32.3■■■□□ 2.76
TOMM40-201ENST00000252487 IL1RAPL2Q9NP60 686 aa32.3■■■□□ 2.76
TOMM40-201ENST00000252487 SASH1O94885 1247 aa32.29■■■□□ 2.76
TOMM40-201ENST00000252487 CRY2Q49AN0 593 aa32.29■■■□□ 2.76
TOMM40-201ENST00000252487 EYA2O00167 538 aa32.29■■■□□ 2.76
TOMM40-201ENST00000252487 CHD1LQ86WJ1 897 aa32.29■■■□□ 2.76
TOMM40-201ENST00000252487 RHPN1Q8TCX5 695 aa32.29■■■□□ 2.76
TOMM40-201ENST00000252487 RPGRQ92834 1020 aaKnown RBP32.28■■■□□ 2.76
TOMM40-201ENST00000252487 LRRCC1Q9C099 1032 aa32.28■■■□□ 2.76
TOMM40-201ENST00000252487 RAB11FIP3O75154 756 aa32.27■■■□□ 2.76
TOMM40-201ENST00000252487 HSP90AB4PQ58FF6 505 aa32.27■■■□□ 2.76
TOMM40-201ENST00000252487 LDHAL6AQ6ZMR3 332 aa32.27■■■□□ 2.76
TOMM40-201ENST00000252487 DDX46Q7L014 1031 aaKnown RBP32.27■■■□□ 2.76
TOMM40-201ENST00000252487 KLRG2A4D1S0 409 aaPredicted RBP32.26■■■□□ 2.76
TOMM40-201ENST00000252487 SLC51AQ86UW1 340 aa32.26■■■□□ 2.76
TOMM40-201ENST00000252487 C10orf71Q711Q0 1435 aa32.26■■■□□ 2.75
TOMM40-201ENST00000252487 PDE4AP27815 886 aa32.26■■■□□ 2.75
TOMM40-201ENST00000252487 POLD1P28340 1107 aa32.26■■■□□ 2.75
TOMM40-201ENST00000252487 C16orf71Q8IYS4 520 aaPredicted RBP32.26■■■□□ 2.75
TOMM40-201ENST00000252487 CDC5LQ99459 802 aaKnown RBP32.26■■■□□ 2.75
TOMM40-201ENST00000252487 CNNM1Q9NRU3 951 aa32.26■■■□□ 2.75
TOMM40-201ENST00000252487 TFCP2Q12800 502 aa32.25■■■□□ 2.75
TOMM40-201ENST00000252487 KIF1BPQ96EK5 621 aa32.25■■■□□ 2.75
TOMM40-201ENST00000252487 ANKRD18AQ8IVF6 992 aa32.24■■■□□ 2.75
TOMM40-201ENST00000252487 SGIP1Q9BQI5 828 aa32.24■■■□□ 2.75
TOMM40-201ENST00000252487 CIAO1O76071 339 aa32.23■■■□□ 2.75
TOMM40-201ENST00000252487 PDE6BP35913 854 aa32.23■■■□□ 2.75
TOMM40-201ENST00000252487 IGHMBP2P38935 993 aaKnown RBP32.23■■■□□ 2.75
TOMM40-201ENST00000252487 RGS3P49796 1198 aa32.23■■■□□ 2.75
TOMM40-201ENST00000252487 OTUD7AQ8TE49 926 aaPredicted RBP32.23■■■□□ 2.75
TOMM40-201ENST00000252487 MPHOSPH8Q99549 860 aa32.23■■■□□ 2.75
TOMM40-201ENST00000252487 ERC1Q8IUD2 1116 aa32.23■■■□□ 2.75
TOMM40-201ENST00000252487 RIPOR2Q9Y4F9 1068 aa32.23■■■□□ 2.75
TOMM40-201ENST00000252487 CHRNA5P30532 468 aa32.22■■■□□ 2.75
TOMM40-201ENST00000252487 IL15P40933 162 aaPredicted RBP32.22■■■□□ 2.75
TOMM40-201ENST00000252487 PTGER2P43116 358 aa32.22■■■□□ 2.75
TOMM40-201ENST00000252487 C2CD5Q86YS7 1000 aa32.22■■■□□ 2.75
TOMM40-201ENST00000252487 ZBTB47Q9UFB7 747 aaPredicted RBP32.22■■■□□ 2.75
TOMM40-201ENST00000252487 SRGNP10124 158 aa32.21■■■□□ 2.75
TOMM40-201ENST00000252487 RBM17Q96I25 401 aaKnown RBP32.21■■■□□ 2.75
TOMM40-201ENST00000252487 RPS8P62241 208 aaKnown RBP32.2■■■□□ 2.75
TOMM40-201ENST00000252487 CACNA1SQ13698 1873 aa32.2■■■□□ 2.75
TOMM40-201ENST00000252487 GRAPQ13588 217 aa32.2■■■□□ 2.74
TOMM40-201ENST00000252487 HELBQ8NG08 1087 aaPredicted RBP32.2■■■□□ 2.74
TOMM40-201ENST00000252487 GRAPLQ8TC17 118 aaPredicted RBP32.2■■■□□ 2.74
TOMM40-201ENST00000252487 HOXA10P31260 410 aaPredicted RBP32.19■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms