RNA–Protein interactions for RNA: ENST00000247295.4

FAM78A-201, Transcript of family with sequence similarity 78 member A, humanhuman

TSL 2

Gene FAM78A, Length 4,560 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78A-201ENST00000247295 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
FAM78A-201ENST00000247295 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 CRACR2AQ9BSW2 395 aa13.12□□□□□ -0.31
FAM78A-201ENST00000247295 COL17A1Q9UMD9 1497 aaPredicted RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 EPB41L2O43491 1005 aaKnown RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 ZSCAN22P10073 491 aaPredicted RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 NMIQ13287 307 aaPredicted RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 SYCP1Q15431 976 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 ENOX2Q16206 610 aaKnown RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 KLHDC4Q8TBB5 520 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 DISP1Q96F81 1524 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 NLRP5P59047 1200 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 DNM1Q05193 864 aaKnown RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 CEP131Q9UPN4 1083 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 ALDH1L1O75891 902 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 HOXC9P31274 260 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■□□□ 14.5
FAM78A-201ENST00000247295 UBE2HP62256 183 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 RAB3GAP1Q15042 981 aa13.11□□□□□ -0.31
FAM78A-201ENST00000247295 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
FAM78A-201ENST00000247295 SNW1Q13573 536 aaKnown RBP13.1□□□□□ -0.31
FAM78A-201ENST00000247295 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 DDX19AQ9NUU7 478 aaKnown RBP13.1□□□□□ -0.31
FAM78A-201ENST00000247295 OGFRQ9NZT2 677 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
FAM78A-201ENST00000247295 CCDC181Q5TID7 509 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 STX8Q9UNK0 236 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 NPHP3Q7Z494 1330 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 ABCC1P33527 1531 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 CCDC96Q2M329 555 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 SLC9C2Q5TAH2 1124 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 ORAI2Q96SN7 254 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 RNF41Q9H4P4 317 aaPredicted RBP13.1□□□□□ -0.31
FAM78A-201ENST00000247295 MCM6Q14566 821 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 CDC5LQ99459 802 aaKnown RBP13.1□□□□□ -0.31
FAM78A-201ENST00000247295 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
FAM78A-201ENST00000247295 TEX14Q8IWB6 1497 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 CFAP43Q8NDM7 1665 aa13.1□□□□□ -0.31
FAM78A-201ENST00000247295 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 KIF4BQ2VIQ3 1234 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 LGR6Q9HBX8 967 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 TOP1P11387 765 aaKnown RBP13.09□□□□□ -0.31
FAM78A-201ENST00000247295 IL13P35225 146 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 UVSSAQ2YD98 709 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 RNF187Q5TA31 235 aaPredicted RBP13.09□□□□□ -0.31
FAM78A-201ENST00000247295 Q6ZUG5 572 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 CATIPQ7Z7H3 387 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 CERS3Q8IU89 383 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
FAM78A-201ENST00000247295 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
FAM78A-201ENST00000247295 HMG20BQ9P0W2 317 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 AK2P54819 239 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 TXLNBQ8N3L3 684 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 MSH6P52701 1360 aa13.09□□□□□ -0.31
FAM78A-201ENST00000247295 DNA2P51530 1060 aa13.08□□□□□ -0.31
FAM78A-201ENST00000247295 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.31
FAM78A-201ENST00000247295 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
FAM78A-201ENST00000247295 PTGS1P23219 599 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 CHMLP26374 656 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 KIAA1328Q86T90 577 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 UBA5Q9GZZ9 404 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 DACT1Q9NYF0 836 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 ARHGEF12Q9NZN5 1544 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 TIMM10P62072 90 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 MCMDC2Q4G0Z9 681 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 FEZ1Q99689 392 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 TMOD2Q9NZR1 351 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.32
FAM78A-201ENST00000247295 SKILP12757 684 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 IDEP14735 1019 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
FAM78A-201ENST00000247295 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.32
FAM78A-201ENST00000247295 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 TFCP2Q12800 502 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 TTF1Q15361 905 aaPredicted RBP13.07□□□□□ -0.32
FAM78A-201ENST00000247295 TMC6Q7Z403 805 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 SMARCC1Q92922 1105 aaPredicted RBP13.07□□□□□ -0.32
FAM78A-201ENST00000247295 RASSF4Q9H2L5 321 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 MARCKSP29966 332 aaPredicted RBP13.07□□□□□ -0.32
FAM78A-201ENST00000247295 CASQ1P31415 396 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 NBPF6Q5VWK0 638 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 NBPF5PQ86XG9 351 aaPredicted RBP13.07□□□□□ -0.32
FAM78A-201ENST00000247295 MYRIPQ8NFW9 859 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 NBPF4Q96M43 638 aa13.07□□□□□ -0.32
FAM78A-201ENST00000247295 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
FAM78A-201ENST00000247295 CYP7A1P22680 504 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms