RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 LRRC2Q9BYS8 371 aa11.62□□□□□ -0.55
SIX1-201ENST00000247182 ATP8B2P98198 1209 aa11.62□□□□□ -0.55
SIX1-201ENST00000247182 AOPEPQ8N6M6 819 aa11.62□□□□□ -0.55
SIX1-201ENST00000247182 DDX19AQ9NUU7 478 aaKnown RBP11.62□□□□□ -0.55
SIX1-201ENST00000247182 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
SIX1-201ENST00000247182 MAP2K2P36507 400 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
SIX1-201ENST00000247182 GUCY1B3Q02153 619 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 RASEFQ8IZ41 740 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 RUFY1Q96T51 708 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 ADGRB1O14514 1584 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 DHX16O60231 1041 aaKnown RBP11.61□□□□□ -0.55
SIX1-201ENST00000247182 CSB-PGBD3P0DP91 1061 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 CLCN6P51797 869 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 CDR1P51861 262 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 TICAM2Q86XR7 235 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 ADGRB3O60242 1522 aa11.61□□□□□ -0.55
SIX1-201ENST00000247182 A0A087WWV3 80 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 GPATCH3Q96I76 525 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 USP44Q9H0E7 712 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
SIX1-201ENST00000247182 BTBD11A6QL63 1104 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 G3BP1Q13283 466 aaKnown RBP eCLIP11.6□□□□□ -0.55
SIX1-201ENST00000247182 IL17REQ8NFR9 667 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 SMARCC1Q92922 1105 aaPredicted RBP11.6□□□□□ -0.55
SIX1-201ENST00000247182 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
SIX1-201ENST00000247182 INTS4Q96HW7 963 aaKnown RBP11.6□□□□□ -0.55
SIX1-201ENST00000247182 ABCC3O15438 1527 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 UHRF1BP1LA0JNW5 1464 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 ZFYVE9O95405 1425 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 PNMA6AP0CW24 399 aaPredicted RBP11.6□□□□□ -0.55
SIX1-201ENST00000247182 GSDMDP57764 484 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 KIF4BQ2VIQ3 1234 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 CCDC12Q8WUD4 166 aaPredicted RBP11.6□□□□□ -0.55
SIX1-201ENST00000247182 ANO10Q9NW15 660 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 LTKP29376 864 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 C1orf141Q5JVX7 400 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 EP400NLQ6ZTU2 488 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 RIC3Q7Z5B4 369 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 CNPY4Q8N129 248 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 PPP6R1Q9UPN7 881 aa11.6□□□□□ -0.55
SIX1-201ENST00000247182 USP27XA6NNY8 438 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 SLC39A6Q13433 755 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 SMARCE1Q969G3 411 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
SIX1-201ENST00000247182 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
SIX1-201ENST00000247182 ZC3H6P61129 1189 aaKnown RBP11.59□□□□□ -0.55
SIX1-201ENST00000247182 NEUROD6Q96NK8 337 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 EPC1Q9H2F5 836 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 PNPLA6Q8IY17 1366 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 SOS1Q07889 1333 aaPredicted RBP11.59□□□□□ -0.55
SIX1-201ENST00000247182 RAB11FIP3O75154 756 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 STK38Q15208 465 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 RNF187Q5TA31 235 aaPredicted RBP11.59□□□□□ -0.55
SIX1-201ENST00000247182 CLEC17AQ6ZS10 378 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 CAGE1Q8TC20 777 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 FAM212AQ96EL1 285 aa11.59□□□□□ -0.55
SIX1-201ENST00000247182 PRAMEF22A3QJZ6 481 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 RHOXF2BP0C7M4 288 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 ST5P78524 1137 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 CEP57Q86XR8 500 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 CPLX3Q8WVH0 158 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 UTP14AQ9BVJ6 771 aaKnown RBP11.58□□□□□ -0.56
SIX1-201ENST00000247182 ZMYM3Q14202 1370 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 SHPRHQ149N8 1683 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 LARGE1O95461 756 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 LRRC8AQ8IWT6 810 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 PPM1EQ8WY54 764 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 KIF1BPQ96EK5 621 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 MAP3K2Q9Y2U5 619 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.58□□□□□ -0.56
SIX1-201ENST00000247182 STX1AQ16623 288 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 ADCK5Q3MIX3 580 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 DNAJC21Q5F1R6 531 aaKnown RBP11.58□□□□□ -0.56
SIX1-201ENST00000247182 BLOC1S2Q6QNY1 142 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 SYNE3Q6ZMZ3 975 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 RAB11FIP4Q86YS3 637 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 FAM107BQ9H098 131 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 IFNKQ9P0W0 207 aa11.58□□□□□ -0.56
SIX1-201ENST00000247182 EDC4Q6P2E9 1401 aaKnown RBP11.57□□□□□ -0.56
SIX1-201ENST00000247182 ZSCAN12O43309 604 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 CTIFO43310 598 aaKnown RBP11.57□□□□□ -0.56
SIX1-201ENST00000247182 CYP2C19P33261 490 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 PTH1RQ03431 593 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 FAM227BQ96M60 508 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 CFAP45Q9UL16 551 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 SNX14Q9Y5W7 946 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 PTCH1Q13635 1447 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 PIK3R4Q99570 1358 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 TOP1P11387 765 aaKnown RBP11.57□□□□□ -0.56
SIX1-201ENST00000247182 LIG3P49916 1009 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 KARSQ15046 597 aaKnown RBP11.57□□□□□ -0.56
SIX1-201ENST00000247182 GBP6Q6ZN66 633 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 CAMSAP1Q5T5Y3 1602 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
SIX1-201ENST00000247182 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
SIX1-201ENST00000247182 CCAR1Q8IX12 1150 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms