RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 ALDH1L1O75891 902 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 PI4KAP1Q8N8J0 262 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 IMPG2Q9BZV3 1241 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 C6orf50Q9HD87 102 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 CLEC11AQ9Y240 323 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 NOS1P29475 1434 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 FSD2A1L4K1 749 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 LMOD1P29536 600 aaPredicted RBP8.42□□□□□ -1.06
SSR1-201ENST00000244763 BICD1Q96G01 975 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 WDR7Q9Y4E6 1490 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 GRM8O00222 908 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 NAA16Q6N069 864 aaPredicted RBP8.42□□□□□ -1.06
SSR1-201ENST00000244763 BBXQ8WY36 941 aaPredicted RBP8.42□□□□□ -1.06
SSR1-201ENST00000244763 VAT1LQ9HCJ6 419 aa8.42□□□□□ -1.06
SSR1-201ENST00000244763 SMC1AQ14683 1233 aaKnown RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 ATP2B3Q16720 1220 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 HOOK2Q96ED9 719 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 SH2D4AQ9H788 454 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 EXOC1Q9NV70 894 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 SHTN1A0MZ66 631 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 NAP1L4Q99733 375 aaKnown RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 C19orf44Q9H6X5 657 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 ZBTB43O43298 467 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 FERP16591 822 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 CCDC102AQ96A19 550 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 KRT13P13646 458 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 CTNNBL1Q8WYA6 563 aaPredicted RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 SPDYE3A6NKU9 549 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 CCDC82Q8N4S0 544 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 STX1AQ16623 288 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 MICALCLQ6ZW33 695 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 ORC3Q9UBD5 711 aaPredicted RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 ADGRF5Q8IZF2 1346 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 IDEP14735 1019 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 BMP2KLQ5H9B9 411 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 DHX37Q8IY37 1157 aaKnown RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 ZNF219Q9P2Y4 722 aaPredicted RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 CYP7A1P22680 504 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 CEBPAP49715 358 aaPredicted RBP8.41□□□□□ -1.06
SSR1-201ENST00000244763 SPECC1Q5M775 1068 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 ZNF710Q8N1W2 664 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 MSANTD4Q8NCY6 345 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 NIP7Q9Y221 180 aaKnown RBP eCLIP8.41□□□□□ -1.06
SSR1-201ENST00000244763 EMILIN1Q9Y6C2 1016 aa8.41□□□□□ -1.06
SSR1-201ENST00000244763 F6X3S4 739 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 IL2RBP14784 551 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 FSIP1Q8NA03 581 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 KCNG4Q8TDN1 519 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 FAM107BQ9H098 131 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.4□□□□□ -1.065e-9■■□□□ 12.7
SSR1-201ENST00000244763 SPAG1Q07617 926 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 THOC2Q8NI27 1593 aaKnown RBP8.4□□□□□ -1.06
SSR1-201ENST00000244763 A2MP01023 1474 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 TMCO5BA8MYB1 307 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 MCMDC2Q4G0Z9 681 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 VTI1AQ96AJ9 217 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 LMAN1P49257 510 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 GUCY1B3Q02153 619 aa8.4□□□□□ -1.06
SSR1-201ENST00000244763 WDR97A6NE52 1622 aa8.4□□□□□ -1.07
SSR1-201ENST00000244763 PPP1R2P41236 205 aa8.4□□□□□ -1.07
SSR1-201ENST00000244763 SELENOOQ9BVL4 669 aa8.4□□□□□ -1.07
SSR1-201ENST00000244763 NOP2P46087 812 aaKnown RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 CCT2P78371 535 aaKnown RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 RTN1Q16799 776 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 THUMPD2Q9BTF0 503 aaKnown RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 SLC26A6Q9BXS9 759 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 KSR2Q6VAB6 950 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 EIF2AK4Q9P2K8 1649 aaKnown RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 PHACTR2O75167 634 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 UBE2HP62256 183 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 CEP83Q9Y592 693 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 RPRD2Q5VT52 1461 aaKnown RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 ATP5J2-PTCD1G3V325 749 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 GNA11P29992 359 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 TUBB4BP68371 445 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 CCDC113Q9H0I3 377 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 SYNCQ9H7C4 482 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 IKBKGQ9Y6K9 419 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 TRPM2O94759 1503 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 CYLC1P35663 651 aaPredicted RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 FAM193AP78312 1265 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 GOPCQ9HD26 462 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 DKC1O60832 514 aaKnown RBP eCLIP8.39□□□□□ -1.07
SSR1-201ENST00000244763 BRDTQ58F21 947 aaPredicted RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 DZIP3Q86Y13 1208 aaKnown RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 STK24Q9Y6E0 443 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 RAPGEF6Q8TEU7 1601 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 SMARCA5O60264 1052 aaPredicted RBP8.39□□□□□ -1.07
SSR1-201ENST00000244763 STAT6P42226 847 aa8.39□□□□□ -1.07
SSR1-201ENST00000244763 NUP160Q12769 1436 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 RTL9Q8NET4 1388 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 MAGEB6P1A0A0J9YX57 407 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 FERMT3Q86UX7 667 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 MICU3Q86XE3 530 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 SLC4A4Q9Y6R1 1079 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 EIF4G3O43432 1585 aaKnown RBP8.38□□□□□ -1.07
SSR1-201ENST00000244763 SMARCC2Q8TAQ2 1214 aa8.38□□□□□ -1.07
SSR1-201ENST00000244763 URI1O94763 535 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms