RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 LRSAM1Q6UWE0 723 aa26.24■■□□□ 1.79
RNF39-201ENST00000244360 ATG9AQ7Z3C6 839 aa26.24■■□□□ 1.79
RNF39-201ENST00000244360 PSMA5P28066 241 aa26.23■■□□□ 1.79
RNF39-201ENST00000244360 KCNJ4P48050 445 aa26.23■■□□□ 1.79
RNF39-201ENST00000244360 TSGA10IPQ3SY00 556 aa26.23■■□□□ 1.79
RNF39-201ENST00000244360 RNF20Q5VTR2 975 aa26.23■■□□□ 1.79
RNF39-201ENST00000244360 ZNF589Q86UQ0 364 aaPredicted RBP26.23■■□□□ 1.79
RNF39-201ENST00000244360 EDC3Q96F86 508 aaKnown RBP26.23■■□□□ 1.79
RNF39-201ENST00000244360 USPL1Q5W0Q7 1092 aa26.22■■□□□ 1.79
RNF39-201ENST00000244360 RBSNQ9H1K0 784 aa26.22■■□□□ 1.79
RNF39-201ENST00000244360 ZBTB3Q9H5J0 574 aa26.22■■□□□ 1.79
RNF39-201ENST00000244360 HMG20BQ9P0W2 317 aa26.22■■□□□ 1.79
RNF39-201ENST00000244360 TAF5LO75529 589 aa26.22■■□□□ 1.79
RNF39-201ENST00000244360 PRIM1P49642 420 aaKnown RBP26.22■■□□□ 1.79
RNF39-201ENST00000244360 ISCA1Q9BUE6 129 aa26.22■■□□□ 1.79
RNF39-201ENST00000244360 ALDH8A1Q9H2A2 487 aaPredicted RBP26.22■■□□□ 1.79
RNF39-201ENST00000244360 TMOD3Q9NYL9 352 aa26.22■■□□□ 1.79
RNF39-201ENST00000244360 PDLIM2Q96JY6 352 aa26.21■■□□□ 1.79
RNF39-201ENST00000244360 LARP6Q9BRS8 491 aaKnown RBP26.21■■□□□ 1.79
RNF39-201ENST00000244360 ATG3Q9NT62 314 aa26.21■■□□□ 1.79
RNF39-201ENST00000244360 SMC3Q9UQE7 1217 aa26.21■■□□□ 1.79
RNF39-201ENST00000244360 ZSCAN22P10073 491 aaPredicted RBP26.2■■□□□ 1.79
RNF39-201ENST00000244360 VSIG10Q8N0Z9 540 aa26.2■■□□□ 1.79
RNF39-201ENST00000244360 TMEM87AQ8NBN3 555 aa26.2■■□□□ 1.79
RNF39-201ENST00000244360 SYAP1Q96A49 352 aaPredicted RBP26.2■■□□□ 1.79
RNF39-201ENST00000244360 TMEM63CQ9P1W3 806 aa26.2■■□□□ 1.79
RNF39-201ENST00000244360 MSNP26038 577 aaKnown RBP26.2■■□□□ 1.78
RNF39-201ENST00000244360 IL15P40933 162 aaPredicted RBP26.2■■□□□ 1.78
RNF39-201ENST00000244360 RBM27Q9P2N5 1060 aaKnown RBP26.2■■□□□ 1.78
RNF39-201ENST00000244360 NSFL1CQ9UNZ2 370 aaKnown RBP26.2■■□□□ 1.78
RNF39-201ENST00000244360 SYT1P21579 422 aa26.19■■□□□ 1.78
RNF39-201ENST00000244360 TICAM2Q86XR7 235 aa26.19■■□□□ 1.78
RNF39-201ENST00000244360 ZNF609O15014 1411 aa26.19■■□□□ 1.78
RNF39-201ENST00000244360 STX6O43752 255 aa26.19■■□□□ 1.78
RNF39-201ENST00000244360 ST3GAL1Q11201 340 aa26.19■■□□□ 1.78
RNF39-201ENST00000244360 DISP2A7MBM2 1401 aa26.18■■□□□ 1.78
RNF39-201ENST00000244360 CIAO1O76071 339 aa26.18■■□□□ 1.78
RNF39-201ENST00000244360 TEX13AQ9BXU3 409 aaPredicted RBP26.18■■□□□ 1.78
RNF39-201ENST00000244360 CHMP3Q9Y3E7 222 aa26.18■■□□□ 1.78
RNF39-201ENST00000244360 TRIM28Q13263 835 aaKnown RBP26.18■■□□□ 1.78
RNF39-201ENST00000244360 CCDC83Q8IWF9 413 aa26.18■■□□□ 1.78
RNF39-201ENST00000244360 PALLDQ8WX93 1383 aa26.17■■□□□ 1.78
RNF39-201ENST00000244360 EYA2O00167 538 aa26.17■■□□□ 1.78
RNF39-201ENST00000244360 TCIRG1Q13488 830 aa26.16■■□□□ 1.78
RNF39-201ENST00000244360 ME3Q16798 604 aa26.16■■□□□ 1.78
RNF39-201ENST00000244360 RPS6KB1P23443 525 aa26.16■■□□□ 1.78
RNF39-201ENST00000244360 BLOC1S2Q6QNY1 142 aa26.16■■□□□ 1.78
RNF39-201ENST00000244360 KBTBD3Q8NAB2 608 aa26.16■■□□□ 1.78
RNF39-201ENST00000244360 PIGBQ92521 554 aa26.16■■□□□ 1.78
RNF39-201ENST00000244360 DNAJC2Q99543 621 aaKnown RBP26.16■■□□□ 1.78
RNF39-201ENST00000244360 TPCN1Q9ULQ1 816 aa26.16■■□□□ 1.78
RNF39-201ENST00000244360 ANKRD1Q15327 319 aa26.15■■□□□ 1.78
RNF39-201ENST00000244360 TAF6LQ9Y6J9 622 aa26.15■■□□□ 1.78
RNF39-201ENST00000244360 SH3TC1Q8TE82 1336 aa26.15■■□□□ 1.78
RNF39-201ENST00000244360 NDUFB9Q9Y6M9 179 aa26.15■■□□□ 1.78
RNF39-201ENST00000244360 SYCE3A1L190 88 aa26.14■■□□□ 1.78
RNF39-201ENST00000244360 PHF14O94880 888 aa26.14■■□□□ 1.78
RNF39-201ENST00000244360 F13A1P00488 732 aa26.14■■□□□ 1.78
RNF39-201ENST00000244360 TPM2P07951 284 aa26.14■■□□□ 1.78
RNF39-201ENST00000244360 GJB2P29033 226 aa26.14■■□□□ 1.78
RNF39-201ENST00000244360 COL9A3Q14050 684 aaPredicted RBP26.14■■□□□ 1.78
RNF39-201ENST00000244360 COL14A1Q05707 1796 aaKnown RBP26.14■■□□□ 1.78
RNF39-201ENST00000244360 LRP6O75581 1613 aa26.14■■□□□ 1.78
RNF39-201ENST00000244360 KRT32Q14532 448 aa26.14■■□□□ 1.77
RNF39-201ENST00000244360 MCMDC2Q4G0Z9 681 aa26.14■■□□□ 1.77
RNF39-201ENST00000244360 ASAP1Q9ULH1 1129 aa26.14■■□□□ 1.77
RNF39-201ENST00000244360 USP48Q86UV5 1035 aa26.13■■□□□ 1.77
RNF39-201ENST00000244360 BTG4Q9NY30 223 aa26.13■■□□□ 1.77
RNF39-201ENST00000244360 U3KPZ7 1027 aaPredicted RBP26.13■■□□□ 1.77
RNF39-201ENST00000244360 LRRC24Q50LG9 513 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 DDX46Q7L014 1031 aaKnown RBP26.12■■□□□ 1.77
RNF39-201ENST00000244360 DNAJC10Q8IXB1 793 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 PLA2G12BQ9BX93 195 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 FBXO3Q9UK99 471 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 NOL7Q9UMY1 257 aaKnown RBP26.12■■□□□ 1.77
RNF39-201ENST00000244360 PLCH1Q4KWH8 1693 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 ITGB4P16144 1822 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 SPEF2Q9C093 1822 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 MTMR6Q9Y217 621 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 ATP6V1DQ9Y5K8 247 aa26.12■■□□□ 1.77
RNF39-201ENST00000244360 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.11■■□□□ 1.77
RNF39-201ENST00000244360 PCCAP05165 728 aaPredicted RBP26.11■■□□□ 1.77
RNF39-201ENST00000244360 TOB2Q14106 344 aaPredicted RBP26.11■■□□□ 1.77
RNF39-201ENST00000244360 PAG1Q9NWQ8 432 aa26.11■■□□□ 1.77
RNF39-201ENST00000244360 PDIA4P13667 645 aaKnown RBP26.1■■□□□ 1.77
RNF39-201ENST00000244360 MCM5P33992 734 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 KIF6Q6ZMV9 814 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.1■■□□□ 1.77
RNF39-201ENST00000244360 ZNF594Q96JF6 807 aaPredicted RBP26.1■■□□□ 1.77
RNF39-201ENST00000244360 NEUROD6Q96NK8 337 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 BCL9O00512 1426 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 GADD45BO75293 160 aaPredicted RBP26.1■■□□□ 1.77
RNF39-201ENST00000244360 OFD1O75665 1012 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 STARD3NLO95772 234 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 TIMM10P62072 90 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 GDPD2Q9HCC8 539 aa26.1■■□□□ 1.77
RNF39-201ENST00000244360 NECAB1Q8N987 351 aa26.09■■□□□ 1.77
RNF39-201ENST00000244360 TSPY26PQ9H489 355 aa26.09■■□□□ 1.77
RNF39-201ENST00000244360 HELLSQ9NRZ9 838 aa26.09■■□□□ 1.77
RNF39-201ENST00000244360 CHGBP05060 677 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms