RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ZFYVE16Q7Z3T8 1539 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 NEURL4Q96JN8 1562 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 RNF17Q9BXT8 1623 aaKnown RBP10.49□□□□□ -0.73
CXCR4-201ENST00000241393 NBPF1Q3BBV0 1214 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 C16orf46Q6P387 395 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 POLR3GLQ9BT43 218 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 GRIP2Q9C0E4 1043 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
CXCR4-201ENST00000241393 NUDCQ9Y266 331 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 RNF123Q5XPI4 1314 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 TRPM2O94759 1503 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 DEPDC5O75140 1603 aa10.49□□□□□ -0.73
CXCR4-201ENST00000241393 PTPRTO14522 1441 aa10.48□□□□□ -0.73
CXCR4-201ENST00000241393 NOS2P35228 1153 aa10.48□□□□□ -0.73
CXCR4-201ENST00000241393 SERPINB4P48594 390 aa10.48□□□□□ -0.73
CXCR4-201ENST00000241393 MFAP1P55081 439 aaKnown RBP10.48□□□□□ -0.73
CXCR4-201ENST00000241393 FKBP4Q02790 459 aaKnown RBP eCLIP10.48□□□□□ -0.73
CXCR4-201ENST00000241393 WDR44Q5JSH3 913 aa10.48□□□□□ -0.73
CXCR4-201ENST00000241393 HELQQ8TDG4 1101 aa10.48□□□□□ -0.73
CXCR4-201ENST00000241393 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
CXCR4-201ENST00000241393 PARD3Q8TEW0 1356 aa10.48□□□□□ -0.73
CXCR4-201ENST00000241393 SPAG9O60271 1321 aaKnown RBP10.47□□□□□ -0.73
CXCR4-201ENST00000241393 AXIN1O15169 862 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 FAM13AO94988 1023 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 TBCELQ5QJ74 424 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 C6orf118Q5T5N4 469 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 ABCA9Q8IUA7 1624 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 ICMTO60725 284 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 C1orf53Q5VUE5 145 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 NLRP13Q86W25 1043 aa10.47□□□□□ -0.73
CXCR4-201ENST00000241393 VWDEQ8N2E2 1590 aa10.46□□□□□ -0.73
CXCR4-201ENST00000241393 INO80Q9ULG1 1556 aaPredicted RBP10.46□□□□□ -0.73
CXCR4-201ENST00000241393 SPATA31C2B4DYI2 1134 aa10.46□□□□□ -0.74
CXCR4-201ENST00000241393 H3BRB1 525 aa10.46□□□□□ -0.74
CXCR4-201ENST00000241393 TATP17735 454 aaPredicted RBP10.46□□□□□ -0.74
CXCR4-201ENST00000241393 LYSMD3Q7Z3D4 306 aa10.46□□□□□ -0.74
CXCR4-201ENST00000241393 TESK2Q96S53 571 aa10.46□□□□□ -0.74
CXCR4-201ENST00000241393 TUT1Q9H6E5 874 aaKnown RBP10.46□□□□□ -0.74
CXCR4-201ENST00000241393 SEPT3Q9UH03 358 aa10.46□□□□□ -0.74
CXCR4-201ENST00000241393 GPC6Q9Y625 555 aaPredicted RBP10.46□□□□□ -0.74
CXCR4-201ENST00000241393 TET3O43151 1660 aa10.46□□□□□ -0.74
CXCR4-201ENST00000241393 EML1O00423 815 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 ERCC3P19447 782 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 RGL3Q3MIN7 710 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 ALKBH2Q6NS38 261 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 POTEAQ6S8J7 498 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 CRIPAKQ8N1N5 446 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 ABTB2Q8N961 1025 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 MYO19Q96H55 970 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 SCAPERQ9BY12 1400 aa10.45□□□□□ -0.74
CXCR4-201ENST00000241393 TTLL8A6PVC2 850 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 TMF1P82094 1093 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 NAA30Q147X3 362 aaPredicted RBP10.44□□□□□ -0.74
CXCR4-201ENST00000241393 RTN1Q16799 776 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 ZDHHC3Q9NYG2 299 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 MADDQ8WXG6 1647 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 ATP7AQ04656 1500 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 CEP152O94986 1710 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 SPHKAPQ2M3C7 1700 aa10.44□□□□□ -0.74
CXCR4-201ENST00000241393 PURBQ96QR8 312 aaKnown RBP10.44□□□□□ -0.74
CXCR4-201ENST00000241393 KANK1Q14678 1352 aa10.43□□□□□ -0.74
CXCR4-201ENST00000241393 FANCAO15360 1455 aa10.43□□□□□ -0.74
CXCR4-201ENST00000241393 CTSOP43234 321 aaPredicted RBP10.43□□□□□ -0.74
CXCR4-201ENST00000241393 PLA2G4AP47712 749 aa10.43□□□□□ -0.74
CXCR4-201ENST00000241393 PDE3BQ13370 1112 aa10.43□□□□□ -0.74
CXCR4-201ENST00000241393 ZNF211Q13398 564 aaPredicted RBP10.43□□□□□ -0.74
CXCR4-201ENST00000241393 NGLY1Q96IV0 654 aa10.43□□□□□ -0.74
CXCR4-201ENST00000241393 IQGAP1P46940 1657 aa10.42□□□□□ -0.74
CXCR4-201ENST00000241393 BRD2P25440 801 aaKnown RBP10.42□□□□□ -0.74
CXCR4-201ENST00000241393 IRX6P78412 446 aaPredicted RBP10.42□□□□□ -0.74
CXCR4-201ENST00000241393 ALDH16A1Q8IZ83 802 aa10.42□□□□□ -0.74
CXCR4-201ENST00000241393 NEUROD4Q9HD90 331 aa10.42□□□□□ -0.74
CXCR4-201ENST00000241393 DNMT3AQ9Y6K1 912 aaPredicted RBP10.42□□□□□ -0.74
CXCR4-201ENST00000241393 KIAA1210Q9ULL0 1709 aa10.42□□□□□ -0.74
CXCR4-201ENST00000241393 FANCIQ9NVI1 1328 aa10.42□□□□□ -0.74
CXCR4-201ENST00000241393 C4orf17Q53FE4 359 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 FOXD4L5Q5VV16 416 aaPredicted RBP10.41□□□□□ -0.74
CXCR4-201ENST00000241393 RNF217Q8TC41 542 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 AIDAQ96BJ3 306 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 STIM2Q9P246 746 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 USP3Q9Y6I4 520 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 DISP3Q9P2K9 1392 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 SCNN1AP37088 669 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 NBPF10Q6P3W6 841 aaKnown RBP10.41□□□□□ -0.74
CXCR4-201ENST00000241393 ZDHHC1Q8WTX9 485 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 PHACTR1Q9C0D0 580 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 ANKIB1Q9P2G1 1089 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 HCN4Q9Y3Q4 1203 aa10.41□□□□□ -0.74
CXCR4-201ENST00000241393 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
CXCR4-201ENST00000241393 CLTCL1P53675 1640 aa10.4□□□□□ -0.74
CXCR4-201ENST00000241393 A0A1B0GTH6 734 aa10.4□□□□□ -0.74
CXCR4-201ENST00000241393 MARSP56192 900 aaKnown RBP10.4□□□□□ -0.74
CXCR4-201ENST00000241393 C11orf91Q3C1V1 193 aa10.4□□□□□ -0.74
CXCR4-201ENST00000241393 PRICKLE2Q7Z3G6 844 aa10.4□□□□□ -0.74
CXCR4-201ENST00000241393 ANP32EQ9BTT0 268 aa10.4□□□□□ -0.74
CXCR4-201ENST00000241393 FAM13BQ9NYF5 915 aa10.4□□□□□ -0.74
CXCR4-201ENST00000241393 ADGRL1O94910 1474 aa10.4□□□□□ -0.75
CXCR4-201ENST00000241393 LMTK2Q8IWU2 1503 aa10.39□□□□□ -0.75
CXCR4-201ENST00000241393 AFAP1Q8N556 730 aa10.39□□□□□ -0.75
CXCR4-201ENST00000241393 RHPN1Q8TCX5 695 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms