RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
PDZD11-201ENST00000239666 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
PDZD11-201ENST00000239666 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
PDZD11-201ENST00000239666 IQCA1LA6NCM1 817 aa16.5■□□□□ 0.23
PDZD11-201ENST00000239666 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
PDZD11-201ENST00000239666 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
PDZD11-201ENST00000239666 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
PDZD11-201ENST00000239666 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
PDZD11-201ENST00000239666 C7orf43Q8WVR3 580 aa16.5■□□□□ 0.23
PDZD11-201ENST00000239666 CRAMP1Q96RY5 1269 aa16.5■□□□□ 0.23
PDZD11-201ENST00000239666 IFT57Q9NWB7 429 aa16.5■□□□□ 0.23
PDZD11-201ENST00000239666 COL11A2P13942 1736 aaPredicted RBP16.5■□□□□ 0.23
PDZD11-201ENST00000239666 PDIA6Q15084 440 aa16.49■□□□□ 0.23
PDZD11-201ENST00000239666 SLC10A5Q5PT55 438 aa16.49■□□□□ 0.23
PDZD11-201ENST00000239666 PSMD1Q99460 953 aa16.49■□□□□ 0.23
PDZD11-201ENST00000239666 VPS33BQ9H267 617 aa16.49■□□□□ 0.23
PDZD11-201ENST00000239666 ANP32CO43423 234 aa16.48■□□□□ 0.23
PDZD11-201ENST00000239666 GPTP24298 496 aa16.48■□□□□ 0.23
PDZD11-201ENST00000239666 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
PDZD11-201ENST00000239666 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
PDZD11-201ENST00000239666 JDP2Q8WYK2 163 aa16.48■□□□□ 0.23
PDZD11-201ENST00000239666 CACNA1SQ13698 1873 aa16.48■□□□□ 0.23
PDZD11-201ENST00000239666 APAF1O14727 1248 aa16.47■□□□□ 0.23
PDZD11-201ENST00000239666 AIMP1Q12904 312 aaKnown RBP16.47■□□□□ 0.23
PDZD11-201ENST00000239666 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
PDZD11-201ENST00000239666 TMC4Q7Z404 712 aa16.47■□□□□ 0.23
PDZD11-201ENST00000239666 NUTM1Q86Y26 1132 aa16.47■□□□□ 0.23
PDZD11-201ENST00000239666 PLBD2Q8NHP8 589 aa16.47■□□□□ 0.23
PDZD11-201ENST00000239666 MFRPQ9BY79 579 aa16.47■□□□□ 0.23
PDZD11-201ENST00000239666 TIAM2Q8IVF5 1701 aa16.47■□□□□ 0.23
PDZD11-201ENST00000239666 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
PDZD11-201ENST00000239666 BBOX1O75936 387 aa16.46■□□□□ 0.23
PDZD11-201ENST00000239666 NTSR2O95665 410 aa16.46■□□□□ 0.23
PDZD11-201ENST00000239666 LRP10Q7Z4F1 713 aa16.46■□□□□ 0.23
PDZD11-201ENST00000239666 SUPT20HQ8NEM7 779 aa16.46■□□□□ 0.23
PDZD11-201ENST00000239666 XAGE3Q8WTP9 111 aa16.46■□□□□ 0.23
PDZD11-201ENST00000239666 UBN2Q6ZU65 1347 aa16.45■□□□□ 0.22
PDZD11-201ENST00000239666 CCDC27Q2M243 656 aa16.45■□□□□ 0.22
PDZD11-201ENST00000239666 DUSP27Q5VZP5 1158 aa16.45■□□□□ 0.22
PDZD11-201ENST00000239666 TRMT112Q9UI30 125 aaKnown RBP16.45■□□□□ 0.22
PDZD11-201ENST00000239666 WDR90Q96KV7 1748 aa16.45■□□□□ 0.22
PDZD11-201ENST00000239666 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
PDZD11-201ENST00000239666 DDX58O95786 925 aaKnown RBP16.44■□□□□ 0.22
PDZD11-201ENST00000239666 ZNF853P0CG23 659 aa16.44■□□□□ 0.22
PDZD11-201ENST00000239666 IARSP41252 1262 aaKnown RBP16.44■□□□□ 0.22
PDZD11-201ENST00000239666 SYNE4Q8N205 404 aa16.44■□□□□ 0.22
PDZD11-201ENST00000239666 MBIPQ9NS73 344 aa16.44■□□□□ 0.22
PDZD11-201ENST00000239666 CHPF2Q9P2E5 772 aa16.44■□□□□ 0.22
PDZD11-201ENST00000239666 PRELPP51888 382 aa16.43■□□□□ 0.22
PDZD11-201ENST00000239666 TRIM28Q13263 835 aaKnown RBP16.43■□□□□ 0.22
PDZD11-201ENST00000239666 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
PDZD11-201ENST00000239666 DDX46Q7L014 1031 aaKnown RBP16.43■□□□□ 0.22
PDZD11-201ENST00000239666 NLRP10Q86W26 655 aa16.43■□□□□ 0.22
PDZD11-201ENST00000239666 NECTIN2Q92692 538 aa16.43■□□□□ 0.22
PDZD11-201ENST00000239666 ANKRD36CQ5JPF3 1778 aa16.43■□□□□ 0.22
PDZD11-201ENST00000239666 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
PDZD11-201ENST00000239666 EIF6P56537 245 aaKnown RBP16.42■□□□□ 0.22
PDZD11-201ENST00000239666 PNMA8AQ86V59 439 aaPredicted RBP16.42■□□□□ 0.22
PDZD11-201ENST00000239666 L3MBTL3Q96JM7 780 aaPredicted RBP16.42■□□□□ 0.22
PDZD11-201ENST00000239666 SCN4AP35499 1836 aa16.42■□□□□ 0.22
PDZD11-201ENST00000239666 ABCC12Q96J65 1359 aa16.41■□□□□ 0.22
PDZD11-201ENST00000239666 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
PDZD11-201ENST00000239666 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
PDZD11-201ENST00000239666 GPC2Q8N158 579 aa16.41■□□□□ 0.22
PDZD11-201ENST00000239666 ATP6V0A2Q9Y487 856 aa16.41■□□□□ 0.22
PDZD11-201ENST00000239666 FZD9O00144 591 aa16.4■□□□□ 0.22
PDZD11-201ENST00000239666 ANXA1P04083 346 aa16.4■□□□□ 0.22
PDZD11-201ENST00000239666 SP8Q8IXZ3 490 aa16.4■□□□□ 0.22
PDZD11-201ENST00000239666 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
PDZD11-201ENST00000239666 IL16Q14005 1332 aa16.4■□□□□ 0.22
PDZD11-201ENST00000239666 DDNO94850 711 aaPredicted RBP16.39■□□□□ 0.21
PDZD11-201ENST00000239666 STK31Q9BXU1 1019 aa16.39■□□□□ 0.21
PDZD11-201ENST00000239666 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
PDZD11-201ENST00000239666 HACL1Q9UJ83 578 aa16.39■□□□□ 0.21
PDZD11-201ENST00000239666 CEP350Q5VT06 3117 aa16.39■□□□□ 0.21
PDZD11-201ENST00000239666 LDHDQ86WU2 507 aa16.38■□□□□ 0.21
PDZD11-201ENST00000239666 LARGE2Q8N3Y3 721 aa16.38■□□□□ 0.21
PDZD11-201ENST00000239666 FBXO22Q8NEZ5 403 aa16.38■□□□□ 0.21
PDZD11-201ENST00000239666 ISCA1Q9BUE6 129 aa16.38■□□□□ 0.21
PDZD11-201ENST00000239666 LMOD1P29536 600 aaPredicted RBP16.37■□□□□ 0.21
PDZD11-201ENST00000239666 GRAPQ13588 217 aa16.37■□□□□ 0.21
PDZD11-201ENST00000239666 KRT24Q2M2I5 525 aa16.37■□□□□ 0.21
PDZD11-201ENST00000239666 NIM1KQ8IY84 436 aa16.37■□□□□ 0.21
PDZD11-201ENST00000239666 CCDC191Q8NCU4 936 aa16.37■□□□□ 0.21
PDZD11-201ENST00000239666 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
PDZD11-201ENST00000239666 POTECB2RU33 542 aa16.36■□□□□ 0.21
PDZD11-201ENST00000239666 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
PDZD11-201ENST00000239666 SF3B3Q15393 1217 aaKnown RBP16.36■□□□□ 0.21
PDZD11-201ENST00000239666 IER5LQ5T953 404 aa16.36■□□□□ 0.21
PDZD11-201ENST00000239666 DPP8Q6V1X1 898 aaPredicted RBP16.36■□□□□ 0.21
PDZD11-201ENST00000239666 MPNDQ8N594 471 aa16.36■□□□□ 0.21
PDZD11-201ENST00000239666 DNAJC5GQ8N7S2 189 aa16.36■□□□□ 0.21
PDZD11-201ENST00000239666 KLRG1Q96E93 195 aa16.36■□□□□ 0.21
PDZD11-201ENST00000239666 RTFDC1Q9BY42 306 aaPredicted RBP16.36■□□□□ 0.21
PDZD11-201ENST00000239666 WDR63Q8IWG1 891 aa16.35■□□□□ 0.21
PDZD11-201ENST00000239666 WWC1Q8IX03 1113 aa16.35■□□□□ 0.21
PDZD11-201ENST00000239666 ZBTB38Q8NAP3 1195 aaPredicted RBP16.35■□□□□ 0.21
PDZD11-201ENST00000239666 TAF1DQ9H5J8 278 aaPredicted RBP16.35■□□□□ 0.21
PDZD11-201ENST00000239666 ABCC4O15439 1325 aa16.35■□□□□ 0.21
PDZD11-201ENST00000239666 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms