RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 BCL9LQ86UU0 1499 aa28.07■■■□□ 2.08
MSX2-201ENST00000239243 IFIT5Q13325 482 aaKnown RBP28.06■■■□□ 2.08
MSX2-201ENST00000239243 SNX14Q9Y5W7 946 aa28.06■■■□□ 2.08
MSX2-201ENST00000239243 CCDC171Q6TFL3 1326 aa28.06■■■□□ 2.08
MSX2-201ENST00000239243 PALLDQ8WX93 1383 aa28.06■■■□□ 2.08
MSX2-201ENST00000239243 DDX11L8A8MPP1 907 aa28.06■■■□□ 2.08
MSX2-201ENST00000239243 GSE1Q14687 1217 aa28.06■■■□□ 2.08
MSX2-201ENST00000239243 ZNF594Q96JF6 807 aaPredicted RBP28.06■■■□□ 2.08
MSX2-201ENST00000239243 CEP126Q9P2H0 1117 aa28.06■■■□□ 2.08
MSX2-201ENST00000239243 NUCB2P80303 420 aa28.05■■■□□ 2.08
MSX2-201ENST00000239243 LRRC24Q50LG9 513 aa28.05■■■□□ 2.08
MSX2-201ENST00000239243 TAF7LQ5H9L4 462 aa28.05■■■□□ 2.08
MSX2-201ENST00000239243 TNPO1Q92973 898 aaKnown RBP28.05■■■□□ 2.08
MSX2-201ENST00000239243 NEUROD6Q96NK8 337 aa28.05■■■□□ 2.08
MSX2-201ENST00000239243 SPATA31A6Q5VVP1 1343 aa28.04■■■□□ 2.08
MSX2-201ENST00000239243 CRKLP46109 303 aaKnown RBP28.04■■■□□ 2.08
MSX2-201ENST00000239243 INTS5Q6P9B9 1019 aaKnown RBP28.04■■■□□ 2.08
MSX2-201ENST00000239243 FAM98CQ17RN3 349 aaKnown RBP28.04■■■□□ 2.08
MSX2-201ENST00000239243 FAM227BQ96M60 508 aa28.04■■■□□ 2.08
MSX2-201ENST00000239243 TBC1D2BQ9UPU7 963 aa28.04■■■□□ 2.08
MSX2-201ENST00000239243 AKAP2Q9Y2D5 859 aa28.04■■■□□ 2.08
MSX2-201ENST00000239243 ZNF831Q5JPB2 1677 aa28.03■■■□□ 2.08
MSX2-201ENST00000239243 FNBP4Q8N3X1 1017 aaPredicted RBP28.03■■■□□ 2.08
MSX2-201ENST00000239243 TMX3Q96JJ7 454 aa28.03■■■□□ 2.08
MSX2-201ENST00000239243 TRMT112Q9UI30 125 aaKnown RBP28.03■■■□□ 2.08
MSX2-201ENST00000239243 MYH3P11055 1940 aa28.03■■■□□ 2.08
MSX2-201ENST00000239243 ZNF34Q8IZ26 560 aa28.03■■■□□ 2.08
MSX2-201ENST00000239243 MED23Q9ULK4 1368 aa28.02■■■□□ 2.08
MSX2-201ENST00000239243 PTH1RQ03431 593 aa28.02■■■□□ 2.08
MSX2-201ENST00000239243 KCNB2Q92953 911 aa28.02■■■□□ 2.08
MSX2-201ENST00000239243 UPF3BQ9BZI7 483 aaKnown RBP28.02■■■□□ 2.08
MSX2-201ENST00000239243 A0A1B0GUL7 405 aa28.01■■■□□ 2.07
MSX2-201ENST00000239243 IRS4O14654 1257 aaPredicted RBP28.01■■■□□ 2.07
MSX2-201ENST00000239243 CTSWP56202 376 aa28.01■■■□□ 2.07
MSX2-201ENST00000239243 MAP4K1Q92918 833 aa28.01■■■□□ 2.07
MSX2-201ENST00000239243 AK7Q96M32 723 aa28.01■■■□□ 2.07
MSX2-201ENST00000239243 DNAJC2Q99543 621 aaKnown RBP28.01■■■□□ 2.07
MSX2-201ENST00000239243 A0A0D9SFI3 127 aa28■■■□□ 2.07
MSX2-201ENST00000239243 ZKSCAN1P17029 563 aaPredicted RBP28■■■□□ 2.07
MSX2-201ENST00000239243 PTMSP20962 102 aa28■■■□□ 2.07
MSX2-201ENST00000239243 PUS3Q9BZE2 481 aaKnown RBP28■■■□□ 2.07
MSX2-201ENST00000239243 PDE8AO60658 829 aa28■■■□□ 2.07
MSX2-201ENST00000239243 TIMM10P62072 90 aa28■■■□□ 2.07
MSX2-201ENST00000239243 CUL4AQ13619 759 aa28■■■□□ 2.07
MSX2-201ENST00000239243 TTLL11Q8NHH1 800 aa28■■■□□ 2.07
MSX2-201ENST00000239243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28■■■□□ 2.07
MSX2-201ENST00000239243 INTS4Q96HW7 963 aaKnown RBP28■■■□□ 2.07
MSX2-201ENST00000239243 NECTIN1Q15223 517 aa27.99■■■□□ 2.07
MSX2-201ENST00000239243 RASEFQ8IZ41 740 aa27.99■■■□□ 2.07
MSX2-201ENST00000239243 TM6SF1Q9BZW5 370 aa27.99■■■□□ 2.07
MSX2-201ENST00000239243 SPEF2Q9C093 1822 aa27.99■■■□□ 2.07
MSX2-201ENST00000239243 KCNJ4P48050 445 aa27.99■■■□□ 2.07
MSX2-201ENST00000239243 ITPK1Q13572 414 aa27.99■■■□□ 2.07
MSX2-201ENST00000239243 KBTBD3Q8NAB2 608 aa27.99■■■□□ 2.07
MSX2-201ENST00000239243 ANKRD18BA2A2Z9 1011 aa27.98■■■□□ 2.07
MSX2-201ENST00000239243 UBN2Q6ZU65 1347 aa27.98■■■□□ 2.07
MSX2-201ENST00000239243 RNF20Q5VTR2 975 aa27.98■■■□□ 2.07
MSX2-201ENST00000239243 EDC3Q96F86 508 aaKnown RBP27.98■■■□□ 2.07
MSX2-201ENST00000239243 RBM8AQ9Y5S9 174 aaKnown RBP27.98■■■□□ 2.07
MSX2-201ENST00000239243 ITGA6P23229 1130 aa27.97■■■□□ 2.07
MSX2-201ENST00000239243 PRPF40BQ6NWY9 871 aaKnown RBP27.97■■■□□ 2.07
MSX2-201ENST00000239243 CLEC17AQ6ZS10 378 aa27.97■■■□□ 2.07
MSX2-201ENST00000239243 COL5A3P25940 1745 aaPredicted RBP27.97■■■□□ 2.07
MSX2-201ENST00000239243 PARP10Q53GL7 1025 aa27.96■■■□□ 2.07
MSX2-201ENST00000239243 PAG1Q9NWQ8 432 aa27.96■■■□□ 2.07
MSX2-201ENST00000239243 CCDC158Q5M9N0 1113 aa27.96■■■□□ 2.07
MSX2-201ENST00000239243 KCNQ2O43526 872 aa27.95■■■□□ 2.07
MSX2-201ENST00000239243 SYNE4Q8N205 404 aa27.95■■■□□ 2.07
MSX2-201ENST00000239243 ZGPATQ8N5A5 531 aaKnown RBP27.95■■■□□ 2.07
MSX2-201ENST00000239243 TTC14Q96N46 770 aa27.95■■■□□ 2.07
MSX2-201ENST00000239243 CCDC85AQ96PX6 553 aaPredicted RBP27.95■■■□□ 2.07
MSX2-201ENST00000239243 IFIT1P09914 478 aaKnown RBP27.95■■■□□ 2.06
MSX2-201ENST00000239243 HSP90B1P14625 803 aaKnown RBP27.95■■■□□ 2.06
MSX2-201ENST00000239243 GREM2Q9H772 168 aa27.95■■■□□ 2.06
MSX2-201ENST00000239243 USP21Q9UK80 565 aa27.95■■■□□ 2.06
MSX2-201ENST00000239243 CREB3L3Q68CJ9 461 aa27.94■■■□□ 2.06
MSX2-201ENST00000239243 LDHAL6AQ6ZMR3 332 aa27.94■■■□□ 2.06
MSX2-201ENST00000239243 DDX46Q7L014 1031 aaKnown RBP27.94■■■□□ 2.06
MSX2-201ENST00000239243 SH3TC1Q8TE82 1336 aa27.94■■■□□ 2.06
MSX2-201ENST00000239243 CAMTA2O94983 1202 aa27.94■■■□□ 2.06
MSX2-201ENST00000239243 CYP2E1P05181 493 aaPredicted RBP27.94■■■□□ 2.06
MSX2-201ENST00000239243 CASTP20810 708 aaKnown RBP27.94■■■□□ 2.06
MSX2-201ENST00000239243 SSFA2P28290 1259 aa27.94■■■□□ 2.06
MSX2-201ENST00000239243 HMG20BQ9P0W2 317 aa27.94■■■□□ 2.06
MSX2-201ENST00000239243 MYH14Q7Z406 1995 aaKnown RBP27.93■■■□□ 2.06
MSX2-201ENST00000239243 GORABQ5T7V8 394 aa27.93■■■□□ 2.06
MSX2-201ENST00000239243 GOLGA6L22H0YM25 854 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 ZSWIM6Q9HCJ5 1215 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 ZNF652Q9Y2D9 606 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 RIPOR2Q9Y4F9 1068 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 ABCC12Q96J65 1359 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 PSMA5P28066 241 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 LRRFIP1Q32MZ4 808 aaKnown RBP27.92■■■□□ 2.06
MSX2-201ENST00000239243 MCMDC2Q4G0Z9 681 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 JAKMIP1Q96N16 626 aaKnown RBP27.92■■■□□ 2.06
MSX2-201ENST00000239243 UTP14AQ9BVJ6 771 aaKnown RBP27.92■■■□□ 2.06
MSX2-201ENST00000239243 CYP46A1Q9Y6A2 500 aa27.92■■■□□ 2.06
MSX2-201ENST00000239243 GOLIM4O00461 696 aa27.91■■■□□ 2.06
MSX2-201ENST00000239243 TAF5LO75529 589 aa27.91■■■□□ 2.06
MSX2-201ENST00000239243 METTL24Q5JXM2 366 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms