RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 DZIP3Q86Y13 1208 aaKnown RBP11.64□□□□□ -0.55
TGFB3-201ENST00000238682 APLP1P51693 650 aa11.63□□□□□ -0.55
TGFB3-201ENST00000238682 PDIA6Q15084 440 aa11.63□□□□□ -0.55
TGFB3-201ENST00000238682 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
TGFB3-201ENST00000238682 CNBD1Q8NA66 436 aa11.63□□□□□ -0.55
TGFB3-201ENST00000238682 TOMM70O94826 608 aa11.63□□□□□ -0.55
TGFB3-201ENST00000238682 LRP10Q7Z4F1 713 aa11.63□□□□□ -0.55
TGFB3-201ENST00000238682 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
TGFB3-201ENST00000238682 HSPA6P17066 643 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 HSP90AB3PQ58FF7 597 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 CHPF2Q9P2E5 772 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 WDR90Q96KV7 1748 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 ELL2O00472 640 aaPredicted RBP11.62□□□□□ -0.55
TGFB3-201ENST00000238682 NPR1P16066 1061 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 KRT24Q2M2I5 525 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 PARP10Q53GL7 1025 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 KIF6Q6ZMV9 814 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 ZNF526Q8TF50 670 aaPredicted RBP11.62□□□□□ -0.55
TGFB3-201ENST00000238682 VPS33BQ9H267 617 aa11.62□□□□□ -0.55
TGFB3-201ENST00000238682 ANKRD36CQ5JPF3 1778 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 TPTE2Q6XPS3 522 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 FRAT1Q92837 279 aaPredicted RBP11.61□□□□□ -0.55
TGFB3-201ENST00000238682 KIF3CO14782 793 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 PRR5LQ6MZQ0 368 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 FBXW7Q969H0 707 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 TIAM2Q8IVF5 1701 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 ANKRD31Q8N7Z5 1873 aa11.61□□□□□ -0.55
TGFB3-201ENST00000238682 GNAI3P08754 354 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 TRIM28Q13263 835 aaKnown RBP11.6□□□□□ -0.55
TGFB3-201ENST00000238682 C20orf194Q5TEA3 1177 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 TBC1D9BQ66K14 1250 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 C16orf71Q8IYS4 520 aaPredicted RBP11.6□□□□□ -0.55
TGFB3-201ENST00000238682 DNAAF4Q8WXU2 420 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 USP16Q9Y5T5 823 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 KDM4AO75164 1064 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 EIF2S2P20042 333 aaKnown RBP11.6□□□□□ -0.55
TGFB3-201ENST00000238682 ALDH1B1P30837 517 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 NEXNQ0ZGT2 675 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
TGFB3-201ENST00000238682 FAM117AQ9C073 453 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 MAP3K15Q6ZN16 1313 aa11.6□□□□□ -0.55
TGFB3-201ENST00000238682 TRAK2O60296 914 aa11.59□□□□□ -0.55
TGFB3-201ENST00000238682 RTKN2Q8IZC4 609 aa11.59□□□□□ -0.55
TGFB3-201ENST00000238682 LINS1Q8NG48 757 aa11.59□□□□□ -0.55
TGFB3-201ENST00000238682 UTYO14607 1347 aa11.59□□□□□ -0.55
TGFB3-201ENST00000238682 COL11A2P13942 1736 aaPredicted RBP11.59□□□□□ -0.55
TGFB3-201ENST00000238682 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
TGFB3-201ENST00000238682 CRBNQ96SW2 442 aa11.59□□□□□ -0.55
TGFB3-201ENST00000238682 CCDC93Q567U6 631 aa11.58□□□□□ -0.56
TGFB3-201ENST00000238682 ANKRD13DQ6ZTN6 518 aa11.58□□□□□ -0.56
TGFB3-201ENST00000238682 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
TGFB3-201ENST00000238682 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
TGFB3-201ENST00000238682 SMC1BQ8NDV3 1235 aa11.58□□□□□ -0.56
TGFB3-201ENST00000238682 METTL22Q9BUU2 404 aaPredicted RBP11.58□□□□□ -0.56
TGFB3-201ENST00000238682 RNF181Q9P0P0 153 aa11.58□□□□□ -0.56
TGFB3-201ENST00000238682 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.58□□□□□ -0.56
TGFB3-201ENST00000238682 BCL2L13Q9BXK5 485 aa11.58□□□□□ -0.56
TGFB3-201ENST00000238682 SRCIN1Q9C0H9 1055 aa11.58□□□□□ -0.56
TGFB3-201ENST00000238682 BCCIPQ9P287 314 aaKnown RBP eCLIP11.58□□□□□ -0.56
TGFB3-201ENST00000238682 A1BGP04217 495 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 SRGNP10124 158 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 NAP1L5Q96NT1 182 aaPredicted RBP11.57□□□□□ -0.56
TGFB3-201ENST00000238682 ZBTB40Q9NUA8 1239 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 DICER1Q9UPY3 1922 aaKnown RBP11.57□□□□□ -0.56
TGFB3-201ENST00000238682 FER1L6Q2WGJ9 1857 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 GLTPD2A6NH11 291 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 NBPF26B4DH59 902 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 ZBTB7BO15156 539 aaPredicted RBP11.57□□□□□ -0.56
TGFB3-201ENST00000238682 NPHP1O15259 732 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 CHRNA5P30532 468 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 BEND3Q5T5X7 828 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 NBPF10Q6P3W6 841 aaKnown RBP11.57□□□□□ -0.56
TGFB3-201ENST00000238682 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 NBPF15Q8N660 670 aa11.57□□□□□ -0.56
TGFB3-201ENST00000238682 HOXA10P31260 410 aaPredicted RBP11.56□□□□□ -0.56
TGFB3-201ENST00000238682 G2E3Q7L622 706 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 RPAP2Q8IXW5 612 aaPredicted RBP11.56□□□□□ -0.56
TGFB3-201ENST00000238682 XAGE3Q8WTP9 111 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 TAOK3Q9H2K8 898 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 UNCXA6NJT0 531 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 POLA2Q14181 598 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 CRY2Q49AN0 593 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 COPS6Q7L5N1 327 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 RIC3Q7Z5B4 369 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 ITPRIPQ8IWB1 547 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 CCDC191Q8NCU4 936 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 CRAMP1Q96RY5 1269 aa11.56□□□□□ -0.56
TGFB3-201ENST00000238682 FKBP4Q02790 459 aaKnown RBP eCLIP11.55□□□□□ -0.56
TGFB3-201ENST00000238682 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
TGFB3-201ENST00000238682 PSMD1Q99460 953 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 TBC1D2BQ9UPU7 963 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 NOP58Q9Y2X3 529 aaKnown RBP11.55□□□□□ -0.56
TGFB3-201ENST00000238682 SBF1O95248 1867 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 IQCA1LA6NCM1 817 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 RLBP1P12271 317 aa11.55□□□□□ -0.56
TGFB3-201ENST00000238682 VEGFAP15692 232 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms