RNA–Protein interactions for RNA: ENST00000237596.6

PKD2-201, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKD2, Length 5,056 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-201ENST00000237596 PHACTR3Q96KR7 559 aa21.66■■□□□ 1.06
PKD2-201ENST00000237596 ZC3H12CQ9C0D7 883 aaKnown RBP21.66■■□□□ 1.06
PKD2-201ENST00000237596 RRP9O43818 475 aaKnown RBP21.66■■□□□ 1.06
PKD2-201ENST00000237596 TFCP2L1Q9NZI6 479 aa21.66■■□□□ 1.06
PKD2-201ENST00000237596 VAMP4O75379 141 aa21.66■■□□□ 1.06
PKD2-201ENST00000237596 HOXC9P31274 260 aa21.66■■□□□ 1.06
PKD2-201ENST00000237596 CENPHQ9H3R5 247 aa21.66■■□□□ 1.06
PKD2-201ENST00000237596 CWF19L2Q2TBE0 894 aaKnown RBP21.66■■□□□ 1.06
PKD2-201ENST00000237596 CNNM2Q9H8M5 875 aa21.66■■□□□ 1.06
PKD2-201ENST00000237596 RBM8AQ9Y5S9 174 aaKnown RBP21.66■■□□□ 1.06
PKD2-201ENST00000237596 TSPYL6Q8N831 410 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 NSFL1CQ9UNZ2 370 aaKnown RBP21.65■■□□□ 1.06
PKD2-201ENST00000237596 PARD3Q8TEW0 1356 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 KRT24Q2M2I5 525 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 TCEANC2Q96MN5 208 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 CARD14Q9BXL6 1004 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 IRS4O14654 1257 aaPredicted RBP21.65■■□□□ 1.06
PKD2-201ENST00000237596 CWC15Q9P013 229 aaKnown RBP21.65■■□□□ 1.06
PKD2-201ENST00000237596 BIN1O00499 593 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 CCDC178Q5BJE1 867 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 TSPYL1Q9H0U9 437 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 TRPM2O94759 1503 aa21.65■■□□□ 1.06
PKD2-201ENST00000237596 TBC1D32Q96NH3 1257 aa21.64■■□□□ 1.06
PKD2-201ENST00000237596 SAMM50Q9Y512 469 aa21.64■■□□□ 1.06
PKD2-201ENST00000237596 LRRC2Q9BYS8 371 aa21.64■■□□□ 1.05
PKD2-201ENST00000237596 ZSCAN12O43309 604 aa21.64■■□□□ 1.05
PKD2-201ENST00000237596 LIG1P18858 919 aa21.64■■□□□ 1.05
PKD2-201ENST00000237596 ENOX2Q16206 610 aaKnown RBP21.64■■□□□ 1.05
PKD2-201ENST00000237596 ZNF804AQ7Z570 1209 aa21.64■■□□□ 1.05
PKD2-201ENST00000237596 A0A1W2PP64 1363 aa21.64■■□□□ 1.05
PKD2-201ENST00000237596 ANKRD62A6NC57 917 aa21.64■■□□□ 1.05
PKD2-201ENST00000237596 IFIT1BQ5T764 474 aaKnown RBP21.64■■□□□ 1.05
PKD2-201ENST00000237596 BTG4Q9NY30 223 aa21.64■■□□□ 1.05
PKD2-201ENST00000237596 MAPKBP1O60336 1514 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 ABCC1P33527 1531 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 PYM1Q9BRP8 204 aaKnown RBP21.63■■□□□ 1.05
PKD2-201ENST00000237596 EIF3JO75822 258 aaKnown RBP21.63■■□□□ 1.05
PKD2-201ENST00000237596 CETN1Q12798 172 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 CCDC148Q8NFR7 591 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 UBXN4Q92575 508 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 ESYT1Q9BSJ8 1104 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 MTIF2P46199 727 aaKnown RBP21.63■■□□□ 1.05
PKD2-201ENST00000237596 RBM25P49756 843 aaKnown RBP21.63■■□□□ 1.05
PKD2-201ENST00000237596 TRAF1Q13077 416 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 CCDC102BQ68D86 513 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 NECAB1Q8N987 351 aa21.63■■□□□ 1.05
PKD2-201ENST00000237596 HELBQ8NG08 1087 aaPredicted RBP21.63■■□□□ 1.05
PKD2-201ENST00000237596 PCDH11XQ9BZA7 1347 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 PCDH11YQ9BZA8 1340 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 RNMTO43148 476 aaKnown RBP21.62■■□□□ 1.05
PKD2-201ENST00000237596 PPP4R3BQ5MIZ7 849 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 TCERG1LQ5VWI1 586 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 CCDC191Q8NCU4 936 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 TMX3Q96JJ7 454 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 KIF2AO00139 706 aaPredicted RBP21.62■■□□□ 1.05
PKD2-201ENST00000237596 GNAQP50148 359 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 ZSCAN16Q9H4T2 348 aaPredicted RBP21.62■■□□□ 1.05
PKD2-201ENST00000237596 YTHDC2Q9H6S0 1430 aaKnown RBP21.62■■□□□ 1.05
PKD2-201ENST00000237596 TDRD12Q587J7 1177 aaKnown RBP21.62■■□□□ 1.05
PKD2-201ENST00000237596 LEKR1Q6ZMV7 388 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 TAX1BP1Q86VP1 789 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 PAG1Q9NWQ8 432 aa21.62■■□□□ 1.05
PKD2-201ENST00000237596 PICALMQ13492 652 aa21.61■■□□□ 1.05
PKD2-201ENST00000237596 RTN1Q16799 776 aa21.61■■□□□ 1.05
PKD2-201ENST00000237596 ZSCAN30Q86W11 494 aa21.61■■□□□ 1.05
PKD2-201ENST00000237596 PTPN14Q15678 1187 aa21.61■■□□□ 1.05
PKD2-201ENST00000237596 ZRSR2Q15696 482 aaKnown RBP21.61■■□□□ 1.05
PKD2-201ENST00000237596 STXBP4Q6ZWJ1 553 aa21.61■■□□□ 1.05
PKD2-201ENST00000237596 CPLX3Q8WVH0 158 aa21.61■■□□□ 1.05
PKD2-201ENST00000237596 LMTK3Q96Q04 1460 aa21.61■■□□□ 1.05
PKD2-201ENST00000237596 CCDC40Q4G0X9 1142 aa21.6■■□□□ 1.05
PKD2-201ENST00000237596 KANK3Q6NY19 840 aa21.6■■□□□ 1.05
PKD2-201ENST00000237596 NUP88Q99567 741 aaPredicted RBP21.6■■□□□ 1.05
PKD2-201ENST00000237596 CCDC150Q8NCX0 1101 aa21.6■■□□□ 1.05
PKD2-201ENST00000237596 ALG1Q9BT22 464 aa21.6■■□□□ 1.05
PKD2-201ENST00000237596 DDX21Q9NR30 783 aaKnown RBP eCLIP21.6■■□□□ 1.05
PKD2-201ENST00000237596 CLIP2Q9UDT6 1046 aa21.6■■□□□ 1.05
PKD2-201ENST00000237596 ZFYVE9O95405 1425 aa21.6■■□□□ 1.05
PKD2-201ENST00000237596 PARP3Q9Y6F1 533 aa21.59■■□□□ 1.05
PKD2-201ENST00000237596 KIAA0556O60303 1618 aa21.59■■□□□ 1.05
PKD2-201ENST00000237596 KIF5CO60282 957 aa21.59■■□□□ 1.05
PKD2-201ENST00000237596 ANAPC15P60006 121 aa21.59■■□□□ 1.05
PKD2-201ENST00000237596 C16orf71Q8IYS4 520 aaPredicted RBP21.59■■□□□ 1.05
PKD2-201ENST00000237596 USP25Q9UHP3 1055 aa21.59■■□□□ 1.05
PKD2-201ENST00000237596 UQCRHLA0A096LP55 91 aa21.58■■□□□ 1.05
PKD2-201ENST00000237596 YEATS4O95619 227 aa21.58■■□□□ 1.05
PKD2-201ENST00000237596 UQCRHP07919 91 aa21.58■■□□□ 1.05
PKD2-201ENST00000237596 TTC41PQ6P2S7 1318 aa21.58■■□□□ 1.05
PKD2-201ENST00000237596 FAM193AP78312 1265 aa21.58■■□□□ 1.05
PKD2-201ENST00000237596 STX1AQ16623 288 aa21.58■■□□□ 1.04
PKD2-201ENST00000237596 MAGEB6P1A0A0J9YX57 407 aa21.58■■□□□ 1.04
PKD2-201ENST00000237596 ZNF165P49910 485 aa21.58■■□□□ 1.04
PKD2-201ENST00000237596 KIF4BQ2VIQ3 1234 aa21.58■■□□□ 1.04
PKD2-201ENST00000237596 DCTPP1Q9H773 170 aa21.58■■□□□ 1.04
PKD2-201ENST00000237596 BMP15O95972 392 aa21.57■■□□□ 1.04
PKD2-201ENST00000237596 UBE2HP62256 183 aa21.57■■□□□ 1.04
PKD2-201ENST00000237596 CEP85Q6P2H3 762 aa21.57■■□□□ 1.04
PKD2-201ENST00000237596 SYCP3Q8IZU3 236 aa21.57■■□□□ 1.04
PKD2-201ENST00000237596 ORAI2Q96SN7 254 aa21.57■■□□□ 1.04
PKD2-201ENST00000237596 LRRC27Q9C0I9 530 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms