RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 TMEM87AQ8NBN3 555 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 BICD1Q96G01 975 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 MAP3K1Q13233 1512 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 UQCRFS1P1P0C7P4 283 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 DRC1Q96MC2 740 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 CD109Q6YHK3 1445 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 TICAM2Q86XR7 235 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 EHBP1Q8NDI1 1231 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 WTAPQ15007 396 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 KRT28Q7Z3Y7 464 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 SYKP43405 635 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
LAMA4-201ENST00000230538 N4BP3O15049 544 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 CCDC174Q6PII3 467 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 TMX3Q96JJ7 454 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 TRERF1Q96PN7 1200 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 GNG11P61952 73 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 FBXO31Q5XUX0 539 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-201ENST00000230538 PAXIP1Q6ZW49 1069 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-201ENST00000230538 FERMT1Q9BQL6 677 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 KLF18A0A0U1RQI7 1052 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 CAVIN2O95810 425 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 ZSCAN22P10073 491 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-201ENST00000230538 RRAGBQ5VZM2 374 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 KRT23Q9C075 422 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 LRSAM1Q6UWE0 723 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
LAMA4-201ENST00000230538 RPRD2Q5VT52 1461 aaKnown RBP13.22□□□□□ -0.29
LAMA4-201ENST00000230538 SNRPA1P09661 255 aaKnown RBP13.22□□□□□ -0.29
LAMA4-201ENST00000230538 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 SDSP20132 328 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 NGLY1Q96IV0 654 aa13.22□□□□□ -0.29
LAMA4-201ENST00000230538 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.22□□□□□ -0.29
LAMA4-201ENST00000230538 TSPY3P0CV98 308 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 TSPY8P0CW00 308 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 LMAN1P49257 510 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 SPECC1LQ69YQ0 1117 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 PPM1EQ8WY54 764 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 HSF2BPO75031 334 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 CEP112Q8N8E3 955 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 TSNARE1Q96NA8 513 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 PAXBP1Q9Y5B6 917 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 FBLN1P23142 703 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 STAT6P42226 847 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 UBASH3AP57075 661 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 ERMNQ8TAM6 284 aa13.21□□□□□ -0.29
LAMA4-201ENST00000230538 NBPF7P0C2Y1 421 aaPredicted RBP13.21□□□□□ -0.3
LAMA4-201ENST00000230538 ST5P78524 1137 aa13.21□□□□□ -0.3
LAMA4-201ENST00000230538 IFIT1BQ5T764 474 aaKnown RBP13.21□□□□□ -0.3
LAMA4-201ENST00000230538 ZSWIM4Q9H7M6 989 aa13.21□□□□□ -0.3
LAMA4-201ENST00000230538 RFC4P35249 363 aa13.21□□□□□ -0.3
LAMA4-201ENST00000230538 AFMP43652 599 aa13.21□□□□□ -0.3
LAMA4-201ENST00000230538 ANKRD24Q8TF21 1146 aa13.21□□□□□ -0.3
LAMA4-201ENST00000230538 HCLS1P14317 486 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-201ENST00000230538 RBM25P49756 843 aaKnown RBP13.2□□□□□ -0.3
LAMA4-201ENST00000230538 KIAA0753Q2KHM9 967 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 KLHL40Q2TBA0 621 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-201ENST00000230538 MPHOSPH6Q99547 160 aaKnown RBP13.2□□□□□ -0.3
LAMA4-201ENST00000230538 ABCA10Q8WWZ4 1543 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 IL16Q14005 1332 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 ZBTB43O43298 467 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 ACTN2P35609 894 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 ANO6Q4KMQ2 910 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 USP48Q86UV5 1035 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 RHPN1Q8TCX5 695 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 BRF1Q92994 677 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 ZNF622Q969S3 477 aaKnown RBP eCLIP13.2□□□□□ -0.3
LAMA4-201ENST00000230538 CTAGE1Q96RT6 745 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 LRRC2Q9BYS8 371 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 PSMD1Q99460 953 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 STX8Q9UNK0 236 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 IKBKGQ9Y6K9 419 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 AKR1B10O60218 316 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 CKAP4Q07065 602 aaKnown RBP13.2□□□□□ -0.3
LAMA4-201ENST00000230538 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 ANXA1P04083 346 aa13.2□□□□□ -0.3
LAMA4-201ENST00000230538 FERP16591 822 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 BMS1Q14692 1282 aaKnown RBP13.19□□□□□ -0.3
LAMA4-201ENST00000230538 BMP15O95972 392 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 CYP7A1P22680 504 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 HDAC1Q13547 482 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-201ENST00000230538 KCNG4Q8TDN1 519 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-201ENST00000230538 CNNM2Q9H8M5 875 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 ASXL1Q8IXJ9 1541 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 RTN1Q16799 776 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
LAMA4-201ENST00000230538 PABPN1LA6NDY0 278 aaKnown RBP13.18□□□□□ -0.3
LAMA4-201ENST00000230538 ZFYP08048 801 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-201ENST00000230538 HEATR3Q7Z4Q2 680 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 CCDC155Q8N6L0 562 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 PPP1R14CQ8TAE6 165 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms