RNA–Protein interactions for RNA: ENST00000229268.12

USP5-201, Transcript of ubiquitin specific peptidase 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP5, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-201ENST00000229268 A0A1B0GUL7 405 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 ADORA1P30542 326 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 HSP90AB3PQ58FF7 597 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
USP5-201ENST00000229268 NIP7Q9Y221 180 aaKnown RBP eCLIP16.17■□□□□ 0.18
USP5-201ENST00000229268 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 PALLDQ8WX93 1383 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 AOX1Q06278 1338 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 PKP1Q13835 747 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 INTS5Q6P9B9 1019 aaKnown RBP16.17■□□□□ 0.18
USP5-201ENST00000229268 CHAMP1Q96JM3 812 aa16.17■□□□□ 0.18
USP5-201ENST00000229268 METTL24Q5JXM2 366 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 PI16Q6UXB8 463 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 COL16A1Q07092 1604 aaPredicted RBP16.16■□□□□ 0.18
USP5-201ENST00000229268 RUFY2Q8WXA3 655 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 COL14A1Q05707 1796 aaKnown RBP16.16■□□□□ 0.18
USP5-201ENST00000229268 UBN2Q6ZU65 1347 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 PHF14O94880 888 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 SSFA2P28290 1259 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 GTF2E1P29083 439 aaPredicted RBP16.16■□□□□ 0.18
USP5-201ENST00000229268 SUSD4Q5VX71 490 aa16.16■□□□□ 0.18
USP5-201ENST00000229268 ZNF589Q86UQ0 364 aaPredicted RBP16.16■□□□□ 0.18
USP5-201ENST00000229268 PCCAP05165 728 aaPredicted RBP16.15■□□□□ 0.18
USP5-201ENST00000229268 AHDC1Q5TGY3 1603 aaPredicted RBP16.15■□□□□ 0.18
USP5-201ENST00000229268 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
USP5-201ENST00000229268 LSG1Q9H089 658 aaKnown RBP16.15■□□□□ 0.18
USP5-201ENST00000229268 CASTP20810 708 aaKnown RBP16.14■□□□□ 0.17
USP5-201ENST00000229268 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
USP5-201ENST00000229268 SEC31BQ9NQW1 1179 aa16.14■□□□□ 0.17
USP5-201ENST00000229268 IFIT1P09914 478 aaKnown RBP16.14■□□□□ 0.17
USP5-201ENST00000229268 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
USP5-201ENST00000229268 TTLL11Q8NHH1 800 aa16.14■□□□□ 0.17
USP5-201ENST00000229268 JAKMIP1Q96N16 626 aaKnown RBP16.14■□□□□ 0.17
USP5-201ENST00000229268 NPHP1O15259 732 aa16.14■□□□□ 0.17
USP5-201ENST00000229268 TAF5LO75529 589 aa16.14■□□□□ 0.17
USP5-201ENST00000229268 ADCK5Q3MIX3 580 aa16.14■□□□□ 0.17
USP5-201ENST00000229268 TNPO1Q92973 898 aaKnown RBP16.14■□□□□ 0.17
USP5-201ENST00000229268 SNX14Q9Y5W7 946 aa16.14■□□□□ 0.17
USP5-201ENST00000229268 EIF5P55010 431 aaKnown RBP16.13■□□□□ 0.17
USP5-201ENST00000229268 TMX3Q96JJ7 454 aa16.13■□□□□ 0.17
USP5-201ENST00000229268 SHANK3Q9BYB0 1731 aa16.13■□□□□ 0.17
USP5-201ENST00000229268 PLEKHG2Q9H7P9 1386 aa16.13■□□□□ 0.17
USP5-201ENST00000229268 CERKQ8TCT0 537 aa16.13■□□□□ 0.17
USP5-201ENST00000229268 TAF6LQ9Y6J9 622 aa16.13■□□□□ 0.17
USP5-201ENST00000229268 JCADQ9P266 1359 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 AFDNP55196 1824 aaKnown RBP16.12■□□□□ 0.17
USP5-201ENST00000229268 BARGINQ6ZT62 677 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 RBM8AQ9Y5S9 174 aaKnown RBP16.12■□□□□ 0.17
USP5-201ENST00000229268 ANKRD18BA2A2Z9 1011 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 CTSWP56202 376 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 LINC00116Q8NCU8 138 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 SRP68Q9UHB9 627 aaKnown RBP16.12■□□□□ 0.17
USP5-201ENST00000229268 ATP5JP18859 108 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 HSPA4P34932 840 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 VPS72Q15906 364 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 XAGE2Q96GT9 111 aa16.12■□□□□ 0.17
USP5-201ENST00000229268 RAD50Q92878 1312 aa16.11■□□□□ 0.17
USP5-201ENST00000229268 GLI3P10071 1580 aa16.11■□□□□ 0.17
USP5-201ENST00000229268 IQSEC3Q9UPP2 1182 aaPredicted RBP16.11■□□□□ 0.17
USP5-201ENST00000229268 AFF2P51816 1311 aa16.11■□□□□ 0.17
USP5-201ENST00000229268 USP42Q9H9J4 1324 aaKnown RBP16.11■□□□□ 0.17
USP5-201ENST00000229268 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 GNPATO15228 680 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 MCM4P33991 863 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 SCARF1Q14162 830 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 WASHC4Q2M389 1173 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 PAG1Q9NWQ8 432 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
USP5-201ENST00000229268 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
USP5-201ENST00000229268 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
USP5-201ENST00000229268 CCDC158Q5M9N0 1113 aa16.09■□□□□ 0.17
USP5-201ENST00000229268 CCDC171Q6TFL3 1326 aa16.09■□□□□ 0.17
USP5-201ENST00000229268 ATP2B3Q16720 1220 aa16.09■□□□□ 0.17
USP5-201ENST00000229268 CCNL1Q9UK58 526 aaPredicted RBP16.09■□□□□ 0.17
USP5-201ENST00000229268 TAOK2Q9UL54 1235 aa16.09■□□□□ 0.17
USP5-201ENST00000229268 ITGB4P16144 1822 aa16.09■□□□□ 0.17
USP5-201ENST00000229268 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.17
USP5-201ENST00000229268 SH3TC1Q8TE82 1336 aa16.08■□□□□ 0.17
USP5-201ENST00000229268 PDE8AO60658 829 aa16.08■□□□□ 0.16
USP5-201ENST00000229268 VPS53Q5VIR6 699 aa16.08■□□□□ 0.16
USP5-201ENST00000229268 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
USP5-201ENST00000229268 LRRC2Q9BYS8 371 aa16.08■□□□□ 0.16
USP5-201ENST00000229268 SLIT2O94813 1529 aa16.08■□□□□ 0.16
USP5-201ENST00000229268 CAMTA2O94983 1202 aa16.08■□□□□ 0.16
USP5-201ENST00000229268 NCLP19338 710 aaKnown RBP16.08■□□□□ 0.16
USP5-201ENST00000229268 AK2P54819 239 aa16.08■□□□□ 0.16
USP5-201ENST00000229268 GJD4Q96KN9 370 aaPredicted RBP16.08■□□□□ 0.16
USP5-201ENST00000229268 NAP1L2Q9ULW6 460 aaPredicted RBP16.08■□□□□ 0.16
USP5-201ENST00000229268 WTIPA6NIX2 430 aaPredicted RBP16.07■□□□□ 0.16
USP5-201ENST00000229268 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
USP5-201ENST00000229268 ZAP70P43403 619 aa16.07■□□□□ 0.16
USP5-201ENST00000229268 STK3Q13188 491 aa16.07■□□□□ 0.16
USP5-201ENST00000229268 USPL1Q5W0Q7 1092 aa16.07■□□□□ 0.16
USP5-201ENST00000229268 CREB3L3Q68CJ9 461 aa16.07■□□□□ 0.16
USP5-201ENST00000229268 SEPT12Q8IYM1 358 aa16.07■□□□□ 0.16
USP5-201ENST00000229268 ZNF34Q8IZ26 560 aa16.07■□□□□ 0.16
USP5-201ENST00000229268 HAUS7Q99871 368 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms