RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 COL15A1P39059 1388 aa19.38■□□□□ 0.69
LTBR-201ENST00000228918 ADCY5O95622 1261 aa19.37■□□□□ 0.69
LTBR-201ENST00000228918 PDCP20941 246 aa19.37■□□□□ 0.69
LTBR-201ENST00000228918 ANKRD13DQ6ZTN6 518 aa19.37■□□□□ 0.69
LTBR-201ENST00000228918 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.69
LTBR-201ENST00000228918 DBNLQ9UJU6 430 aaKnown RBP19.37■□□□□ 0.69
LTBR-201ENST00000228918 RFX7Q2KHR2 1363 aa19.37■□□□□ 0.69
LTBR-201ENST00000228918 TAF5LO75529 589 aa19.37■□□□□ 0.69
LTBR-201ENST00000228918 ATP5JP18859 108 aa19.37■□□□□ 0.69
LTBR-201ENST00000228918 KRT85P78386 507 aa19.37■□□□□ 0.69
LTBR-201ENST00000228918 EDC3Q96F86 508 aaKnown RBP19.37■□□□□ 0.69
LTBR-201ENST00000228918 PTPN12Q05209 780 aaKnown RBP19.36■□□□□ 0.69
LTBR-201ENST00000228918 RABL6Q3YEC7 729 aaPredicted RBP19.36■□□□□ 0.69
LTBR-201ENST00000228918 TNNI3KQ59H18 835 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 USPL1Q5W0Q7 1092 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 TTC6Q86TZ1 520 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 FPGT-TNNI3KV9GXZ4 949 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 PKD1L3Q7Z443 1732 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 ELP1O95163 1332 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 IFNL2Q8IZJ0 200 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 LAMB4A4D0S4 1761 aa19.36■□□□□ 0.69
LTBR-201ENST00000228918 GLI3P10071 1580 aa19.35■□□□□ 0.69
LTBR-201ENST00000228918 KDM4AO75164 1064 aa19.35■□□□□ 0.69
LTBR-201ENST00000228918 SNRPA1P09661 255 aaKnown RBP19.35■□□□□ 0.69
LTBR-201ENST00000228918 USP16Q9Y5T5 823 aa19.35■□□□□ 0.69
LTBR-201ENST00000228918 PLEKHG2Q9H7P9 1386 aa19.35■□□□□ 0.69
LTBR-201ENST00000228918 TFCP2Q12800 502 aa19.35■□□□□ 0.69
LTBR-201ENST00000228918 FERMT3Q86UX7 667 aa19.35■□□□□ 0.69
LTBR-201ENST00000228918 PROSER2Q86WR7 435 aaPredicted RBP19.35■□□□□ 0.69
LTBR-201ENST00000228918 ZNF609O15014 1411 aa19.34■□□□□ 0.69
LTBR-201ENST00000228918 UQCRHLA0A096LP55 91 aa19.34■□□□□ 0.69
LTBR-201ENST00000228918 UQCRHP07919 91 aa19.34■□□□□ 0.69
LTBR-201ENST00000228918 KRT32Q14532 448 aa19.34■□□□□ 0.69
LTBR-201ENST00000228918 TTC5Q8N0Z6 440 aa19.34■□□□□ 0.69
LTBR-201ENST00000228918 JARID2Q92833 1246 aaPredicted RBP19.34■□□□□ 0.69
LTBR-201ENST00000228918 PIP4K2AP48426 406 aaPredicted RBP19.33■□□□□ 0.68
LTBR-201ENST00000228918 UBE3BQ7Z3V4 1068 aa19.33■□□□□ 0.68
LTBR-201ENST00000228918 FAM173BQ6P4H8 233 aa19.32■□□□□ 0.68
LTBR-201ENST00000228918 SASS6Q6UVJ0 657 aa19.32■□□□□ 0.68
LTBR-201ENST00000228918 DCAF5Q96JK2 942 aa19.32■□□□□ 0.68
LTBR-201ENST00000228918 FMNL2Q96PY5 1086 aa19.32■□□□□ 0.68
LTBR-201ENST00000228918 MPNDQ8N594 471 aa19.32■□□□□ 0.68
LTBR-201ENST00000228918 PIBF1Q8WXW3 757 aa19.32■□□□□ 0.68
LTBR-201ENST00000228918 C19orf44Q9H6X5 657 aa19.32■□□□□ 0.68
LTBR-201ENST00000228918 CYP27B1O15528 508 aa19.31■□□□□ 0.68
LTBR-201ENST00000228918 CCDC192P0DO97 292 aa19.31■□□□□ 0.68
LTBR-201ENST00000228918 PARP4Q9UKK3 1724 aaKnown RBP19.31■□□□□ 0.68
LTBR-201ENST00000228918 CASP7P55210 303 aa19.31■□□□□ 0.68
LTBR-201ENST00000228918 STK3Q13188 491 aa19.31■□□□□ 0.68
LTBR-201ENST00000228918 GTF3C6Q969F1 213 aa19.31■□□□□ 0.68
LTBR-201ENST00000228918 ZNF830Q96NB3 372 aaPredicted RBP19.31■□□□□ 0.68
LTBR-201ENST00000228918 DBNDD2Q9BQY9 259 aa19.31■□□□□ 0.68
LTBR-201ENST00000228918 NDUFB9Q9Y6M9 179 aa19.31■□□□□ 0.68
LTBR-201ENST00000228918 LIG1P18858 919 aa19.3■□□□□ 0.68
LTBR-201ENST00000228918 HAUS7Q99871 368 aa19.3■□□□□ 0.68
LTBR-201ENST00000228918 SCAND2PQ9GZW5 306 aaPredicted RBP19.3■□□□□ 0.68
LTBR-201ENST00000228918 U3KPZ7 1027 aaPredicted RBP19.3■□□□□ 0.68
LTBR-201ENST00000228918 A0A087WZG4 1122 aa19.3■□□□□ 0.68
LTBR-201ENST00000228918 AP5Z1O43299 807 aa19.3■□□□□ 0.68
LTBR-201ENST00000228918 NEK1Q96PY6 1258 aa19.3■□□□□ 0.68
LTBR-201ENST00000228918 DNAJC2Q99543 621 aaKnown RBP19.3■□□□□ 0.68
LTBR-201ENST00000228918 NUP62CLQ9H1M0 184 aa19.3■□□□□ 0.68
LTBR-201ENST00000228918 TTC12Q9H892 705 aaPredicted RBP19.3■□□□□ 0.68
LTBR-201ENST00000228918 LAMA4Q16363 1823 aa19.29■□□□□ 0.68
LTBR-201ENST00000228918 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
LTBR-201ENST00000228918 PTCD1O75127 700 aaKnown RBP19.29■□□□□ 0.68
LTBR-201ENST00000228918 MAP3K11Q16584 847 aa19.29■□□□□ 0.68
LTBR-201ENST00000228918 CCDC129Q6ZRS4 1044 aa19.29■□□□□ 0.68
LTBR-201ENST00000228918 CSB-PGBD3P0DP91 1061 aa19.28■□□□□ 0.68
LTBR-201ENST00000228918 CHGBP05060 677 aa19.28■□□□□ 0.68
LTBR-201ENST00000228918 MCMDC2Q4G0Z9 681 aa19.28■□□□□ 0.68
LTBR-201ENST00000228918 PLBD2Q8NHP8 589 aa19.28■□□□□ 0.68
LTBR-201ENST00000228918 SPATA32Q96LK8 384 aa19.28■□□□□ 0.68
LTBR-201ENST00000228918 SEC62Q99442 399 aaKnown RBP19.28■□□□□ 0.68
LTBR-201ENST00000228918 JAK2O60674 1132 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 CYP21A2P08686 494 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 LEO1Q8WVC0 666 aaPredicted RBP19.27■□□□□ 0.68
LTBR-201ENST00000228918 TJP1Q07157 1748 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 NUP188Q5SRE5 1749 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 DYNC1I1O14576 645 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 NOLC1Q14978 699 aaKnown RBP eCLIP19.27■□□□□ 0.68
LTBR-201ENST00000228918 Q6ZUG5 572 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 DDX46Q7L014 1031 aaKnown RBP19.27■□□□□ 0.68
LTBR-201ENST00000228918 FAM200AQ8TCP9 573 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 CHMP3Q9Y3E7 222 aa19.27■□□□□ 0.68
LTBR-201ENST00000228918 PALLDQ8WX93 1383 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 PLCB2Q00722 1185 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 DDX17Q92841 729 aaKnown RBP19.26■□□□□ 0.67
LTBR-201ENST00000228918 MRVI1Q9Y6F6 885 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 RBM10P98175 930 aaKnown RBP19.26■□□□□ 0.67
LTBR-201ENST00000228918 TYRO3Q06418 890 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 LMBR1LQ6UX01 489 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 KBTBD3Q8NAB2 608 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 MAP7D2Q96T17 732 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 DACT1Q9NYF0 836 aa19.26■□□□□ 0.67
LTBR-201ENST00000228918 TFIP11Q9UBB9 837 aaKnown RBP19.26■□□□□ 0.67
LTBR-201ENST00000228918 CABP4P57796 275 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 RESTQ13127 1097 aa19.25■□□□□ 0.67
LTBR-201ENST00000228918 RBM43Q6ZSC3 357 aaKnown RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms