RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 IPO4Q8TEX9 1081 aaKnown RBP16.89■□□□□ 0.29
PRDM4-201ENST00000228437 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
PRDM4-201ENST00000228437 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.89■□□□□ 0.29
PRDM4-201ENST00000228437 CTIFO43310 598 aaKnown RBP16.88■□□□□ 0.29
PRDM4-201ENST00000228437 KIF4BQ2VIQ3 1234 aa16.88■□□□□ 0.29
PRDM4-201ENST00000228437 TMEM87AQ8NBN3 555 aa16.88■□□□□ 0.29
PRDM4-201ENST00000228437 GTF2A1P52655 376 aaPredicted RBP16.88■□□□□ 0.29
PRDM4-201ENST00000228437 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
PRDM4-201ENST00000228437 PDIA4P13667 645 aaKnown RBP16.88■□□□□ 0.29
PRDM4-201ENST00000228437 RALYLQ86SE5 291 aaKnown RBP16.88■□□□□ 0.29
PRDM4-201ENST00000228437 CCDC82Q8N4S0 544 aa16.88■□□□□ 0.29
PRDM4-201ENST00000228437 TDRD7Q8NHU6 1098 aaKnown RBP16.88■□□□□ 0.29
PRDM4-201ENST00000228437 TULP1O00294 542 aaPredicted RBP16.88■□□□□ 0.29
PRDM4-201ENST00000228437 CCP110O43303 1012 aa16.88■□□□□ 0.29
PRDM4-201ENST00000228437 NFXL1Q6ZNB6 911 aa16.88■□□□□ 0.29
PRDM4-201ENST00000228437 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
PRDM4-201ENST00000228437 LZTFL1Q9NQ48 299 aa16.88■□□□□ 0.29
PRDM4-201ENST00000228437 ZSCAN26Q16670 478 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 JAKMIP3Q5VZ66 844 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 MORC2Q9Y6X9 1032 aaPredicted RBP16.87■□□□□ 0.29
PRDM4-201ENST00000228437 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
PRDM4-201ENST00000228437 MRPS27Q92552 414 aaKnown RBP16.87■□□□□ 0.29
PRDM4-201ENST00000228437 C8orf76Q96K31 380 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
PRDM4-201ENST00000228437 USP28Q96RU2 1077 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 RHOXF2BP0C7M4 288 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 PGBD1Q96JS3 809 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 RHOXF2Q9BQY4 288 aa16.87■□□□□ 0.29
PRDM4-201ENST00000228437 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRDM4-201ENST00000228437 AKAP17AQ02040 695 aaKnown RBP16.86■□□□□ 0.29
PRDM4-201ENST00000228437 FKBP4Q02790 459 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRDM4-201ENST00000228437 ABTB2Q8N961 1025 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 CCDC150Q8NCX0 1101 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 MYO5CQ9NQX4 1742 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 PTPDC1A2A3K4 754 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 BTBD11A6QL63 1104 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 SEC62Q99442 399 aaKnown RBP16.86■□□□□ 0.29
PRDM4-201ENST00000228437 TSPYL1Q9H0U9 437 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 CLTCL1P53675 1640 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 VIRMAQ69YN4 1812 aaKnown RBP16.86■□□□□ 0.29
PRDM4-201ENST00000228437 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
PRDM4-201ENST00000228437 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
PRDM4-201ENST00000228437 YTHDC2Q9H6S0 1430 aaKnown RBP16.86■□□□□ 0.29
PRDM4-201ENST00000228437 ZSCAN12O43309 604 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 TRIM29Q14134 588 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 KRT32Q14532 448 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 TTC14Q96N46 770 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 ZSWIM6Q9HCJ5 1215 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 H0YHG0 523 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 DDX58O95786 925 aaKnown RBP16.85■□□□□ 0.29
PRDM4-201ENST00000228437 SMC1AQ14683 1233 aaKnown RBP16.85■□□□□ 0.29
PRDM4-201ENST00000228437 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 ZNF530Q6P9A1 599 aaPredicted RBP16.85■□□□□ 0.29
PRDM4-201ENST00000228437 CAVIN2O95810 425 aa16.85■□□□□ 0.29
PRDM4-201ENST00000228437 PNMA6AP0CW24 399 aaPredicted RBP16.85■□□□□ 0.29
PRDM4-201ENST00000228437 ZSCAN16Q9H4T2 348 aaPredicted RBP16.85■□□□□ 0.29
PRDM4-201ENST00000228437 PIK3R4Q99570 1358 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 ACEP12821 1306 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 MAP3K19Q56UN5 1328 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 EYA1Q99502 592 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 STAP2Q9UGK3 403 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
PRDM4-201ENST00000228437 PPP1R13BQ96KQ4 1090 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 TRPM2O94759 1503 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 RASSF8Q8NHQ8 419 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 DEF6Q9H4E7 631 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 SNRKQ9NRH2 765 aa16.84■□□□□ 0.29
PRDM4-201ENST00000228437 ABCA8O94911 1581 aa16.83■□□□□ 0.29
PRDM4-201ENST00000228437 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.29
PRDM4-201ENST00000228437 GOLIM4O00461 696 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 DRC1Q96MC2 740 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 DESI2Q9BSY9 194 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 FAM135BQ49AJ0 1406 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 TPM1P09493 284 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 FAM160A1Q05DH4 1040 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 PLA2G4DQ86XP0 818 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 PI4K2BQ8TCG2 481 aa16.83■□□□□ 0.28
PRDM4-201ENST00000228437 CBFA2T2O43439 604 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 PPARDQ03181 441 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 DPCR1Q3MIW9 517 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 FUCA2Q9BTY2 467 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 TRIM66O15016 1216 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 PPFIBP1Q86W92 1011 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 LRRN4CLQ8ND94 238 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 GDAP1L1Q96MZ0 367 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 ORC3Q9UBD5 711 aaPredicted RBP16.82■□□□□ 0.28
PRDM4-201ENST00000228437 ABCC1P33527 1531 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 RXRAP19793 462 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 FANCCQ00597 558 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 RAD51AP2Q09MP3 1159 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 TRDNQ13061 729 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 CPLX2Q6PUV4 134 aaKnown RBP16.82■□□□□ 0.28
PRDM4-201ENST00000228437 CAGE1Q8TC20 777 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 RAI14Q9P0K7 980 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 ZFYVE9O95405 1425 aa16.82■□□□□ 0.28
PRDM4-201ENST00000228437 EIF3JO75822 258 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms