RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 RAD50Q92878 1312 aa18.47■□□□□ 0.55
PXN-201ENST00000228307 CDC42BPGQ6DT37 1551 aa18.47■□□□□ 0.55
PXN-201ENST00000228307 CFAP45Q9UL16 551 aa18.47■□□□□ 0.55
PXN-201ENST00000228307 DLC1Q96QB1 1528 aa18.46■□□□□ 0.55
PXN-201ENST00000228307 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
PXN-201ENST00000228307 ANKRD13DQ6ZTN6 518 aa18.46■□□□□ 0.55
PXN-201ENST00000228307 LIG1P18858 919 aa18.46■□□□□ 0.55
PXN-201ENST00000228307 LARP1Q6PKG0 1096 aaKnown RBP18.46■□□□□ 0.55
PXN-201ENST00000228307 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
PXN-201ENST00000228307 CCT2P78371 535 aaKnown RBP18.45■□□□□ 0.54
PXN-201ENST00000228307 STK38Q15208 465 aa18.45■□□□□ 0.54
PXN-201ENST00000228307 SYNE3Q6ZMZ3 975 aa18.45■□□□□ 0.54
PXN-201ENST00000228307 GIGYF1O75420 1035 aaPredicted RBP18.45■□□□□ 0.54
PXN-201ENST00000228307 SKILP12757 684 aa18.45■□□□□ 0.54
PXN-201ENST00000228307 CEP57L1Q8IYX8 460 aa18.45■□□□□ 0.54
PXN-201ENST00000228307 ERBB3P21860 1342 aa18.45■□□□□ 0.54
PXN-201ENST00000228307 MED14O60244 1454 aa18.45■□□□□ 0.54
PXN-201ENST00000228307 BIN1O00499 593 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 CDC37L1Q7L3B6 337 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 KIF18AQ8NI77 898 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 TECPR2O15040 1411 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 CCDC66A2RUB6 948 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 ADCK5Q3MIX3 580 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 PDILTQ8N807 584 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 EVI5LQ96CN4 794 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
PXN-201ENST00000228307 GTF2E1P29083 439 aaPredicted RBP18.43■□□□□ 0.54
PXN-201ENST00000228307 PTH1RQ03431 593 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 STK11IPQ8N1F8 1099 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 CBX8Q9HC52 389 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 KIF24Q5T7B8 1368 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 LARGE1O95461 756 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 ISM2Q6H9L7 571 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 GTPBP4Q9BZE4 634 aaKnown RBP18.43■□□□□ 0.54
PXN-201ENST00000228307 MTMR6Q9Y217 621 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 RIMS1Q86UR5 1692 aaKnown RBP18.43■□□□□ 0.54
PXN-201ENST00000228307 CREB3L3Q68CJ9 461 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 KSR2Q6VAB6 950 aa18.43■□□□□ 0.54
PXN-201ENST00000228307 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
PXN-201ENST00000228307 ME3Q16798 604 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 TTC6Q86TZ1 520 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 HYPKQ9NX55 129 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
PXN-201ENST00000228307 VPS53Q5VIR6 699 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 BRF1Q92994 677 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 BICC1Q9H694 974 aaKnown RBP18.42■□□□□ 0.54
PXN-201ENST00000228307 SHPRHQ149N8 1683 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 CEP170BQ9Y4F5 1589 aaPredicted RBP18.42■□□□□ 0.54
PXN-201ENST00000228307 RGS12O14924 1447 aa18.42■□□□□ 0.54
PXN-201ENST00000228307 KIAA1524Q8TCG1 905 aa18.41■□□□□ 0.54
PXN-201ENST00000228307 ARGLU1Q9NWB6 273 aaPredicted RBP18.41■□□□□ 0.54
PXN-201ENST00000228307 USP31Q70CQ4 1352 aa18.41■□□□□ 0.54
PXN-201ENST00000228307 GRM8O00222 908 aa18.41■□□□□ 0.54
PXN-201ENST00000228307 BRINP3Q76B58 766 aa18.41■□□□□ 0.54
PXN-201ENST00000228307 CCAR1Q8IX12 1150 aaKnown RBP18.41■□□□□ 0.54
PXN-201ENST00000228307 ZNF396Q96N95 335 aaPredicted RBP18.41■□□□□ 0.54
PXN-201ENST00000228307 TOMM22Q9NS69 142 aa18.41■□□□□ 0.54
PXN-201ENST00000228307 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 WASHC4Q2M389 1173 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 TEX35Q5T0J7 233 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 BICDL1Q6ZP65 573 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 ERCC4Q92889 916 aaPredicted RBP18.4■□□□□ 0.54
PXN-201ENST00000228307 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 PAXBP1Q9Y5B6 917 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 PHKG2P15735 406 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 FSIP1Q8NA03 581 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 ZBTB9Q96C00 473 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 SNRKQ9NRH2 765 aa18.4■□□□□ 0.54
PXN-201ENST00000228307 EDC3Q96F86 508 aaKnown RBP18.4■□□□□ 0.54
PXN-201ENST00000228307 POLR3GO15318 223 aaPredicted RBP18.39■□□□□ 0.53
PXN-201ENST00000228307 CYP27B1O15528 508 aa18.39■□□□□ 0.53
PXN-201ENST00000228307 SERPINC1P01008 464 aa18.39■□□□□ 0.53
PXN-201ENST00000228307 SFPQP23246 707 aaKnown RBP eCLIP18.39■□□□□ 0.53
PXN-201ENST00000228307 SUCLG2Q96I99 432 aa18.39■□□□□ 0.53
PXN-201ENST00000228307 SMTNL1A8MU46 457 aa18.39■□□□□ 0.53
PXN-201ENST00000228307 FKBP4Q02790 459 aaKnown RBP eCLIP18.38■□□□□ 0.53
PXN-201ENST00000228307 TMX1Q9H3N1 280 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 ANO10Q9NW15 660 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.38■□□□□ 0.53
PXN-201ENST00000228307 ADGRL3Q9HAR2 1447 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 CCDC171Q6TFL3 1326 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 APPP05067 770 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 DMTNQ08495 405 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 LMBR1LQ6UX01 489 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 UBXN4Q92575 508 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 IL25Q9H293 177 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 TBC1D2BQ9UPU7 963 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 IL2RBP14784 551 aa18.38■□□□□ 0.53
PXN-201ENST00000228307 NAA30Q147X3 362 aaPredicted RBP18.37■□□□□ 0.53
PXN-201ENST00000228307 TMC6Q7Z403 805 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 NEK1Q96PY6 1258 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 ATP2B1P20020 1258 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 KRT32Q14532 448 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 DDX21Q9NR30 783 aaKnown RBP eCLIP18.37■□□□□ 0.53
PXN-201ENST00000228307 A0A087WWV3 80 aa18.37■□□□□ 0.53
PXN-201ENST00000228307 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms