RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 BCL2L12Q9HB09 334 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 PDIA4P13667 645 aaKnown RBP15.94■□□□□ 0.14
NFKB1-201ENST00000226574 ANKLE2Q86XL3 938 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 MYRIPQ8NFW9 859 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 GTF3C6Q969F1 213 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 CENPHQ9H3R5 247 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 HMGB1P09429 215 aaKnown RBP15.94■□□□□ 0.14
NFKB1-201ENST00000226574 SYKP43405 635 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 MCMDC2Q4G0Z9 681 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 DBNDD2Q9BQY9 259 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 SLC26A6Q9BXS9 759 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 H0YHG0 523 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 SLC27A2O14975 620 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 CDKL5O76039 1030 aa15.94■□□□□ 0.14
NFKB1-201ENST00000226574 IFIT5Q13325 482 aaKnown RBP15.94■□□□□ 0.14
NFKB1-201ENST00000226574 MRPS27Q92552 414 aaKnown RBP15.94■□□□□ 0.14
NFKB1-201ENST00000226574 ZSCAN16Q9H4T2 348 aaPredicted RBP15.94■□□□□ 0.14
NFKB1-201ENST00000226574 ATP10AO60312 1499 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 SEC62Q99442 399 aaKnown RBP15.93■□□□□ 0.14
NFKB1-201ENST00000226574 ZHX3Q9H4I2 956 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 NRBP1Q9UHY1 535 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 GOLGA8AA7E2F4 631 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 ACBD3Q9H3P7 528 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 PYCARDQ9ULZ3 195 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 PAXBP1Q9Y5B6 917 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 IARSP41252 1262 aaKnown RBP15.93■□□□□ 0.14
NFKB1-201ENST00000226574 AFMP43652 599 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 MCM6Q14566 821 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 ENOX2Q16206 610 aaKnown RBP15.93■□□□□ 0.14
NFKB1-201ENST00000226574 TTC6Q86TZ1 520 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 AK7Q96M32 723 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 HMG20BQ9P0W2 317 aa15.93■□□□□ 0.14
NFKB1-201ENST00000226574 RANBP6O60518 1105 aaKnown RBP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 IBSPP21815 317 aaPredicted RBP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 CASQ1P31415 396 aa15.92■□□□□ 0.14
NFKB1-201ENST00000226574 KIF2CQ99661 725 aa15.92■□□□□ 0.14
NFKB1-201ENST00000226574 NOL10Q9BSC4 688 aaKnown RBP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 SLC12A7Q9Y666 1083 aa15.92■□□□□ 0.14
NFKB1-201ENST00000226574 SSBP05455 408 aaKnown RBP eCLIP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 KRT222Q8N1A0 295 aa15.92■□□□□ 0.14
NFKB1-201ENST00000226574 HELBQ8NG08 1087 aaPredicted RBP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 CCDC12Q8WUD4 166 aaPredicted RBP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 LEO1Q8WVC0 666 aaPredicted RBP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
NFKB1-201ENST00000226574 ATP2B2Q01814 1243 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 CWC15Q9P013 229 aaKnown RBP15.91■□□□□ 0.14
NFKB1-201ENST00000226574 ZNF518AQ6AHZ1 1483 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 ZNF500O60304 480 aaPredicted RBP15.91■□□□□ 0.14
NFKB1-201ENST00000226574 HOXC9P31274 260 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 STX17P56962 302 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 GSDMDP57764 484 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 NR1I2O75469 434 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 METAP2P50579 478 aaKnown RBP eCLIP15.91■□□□□ 0.14
NFKB1-201ENST00000226574 KARSQ15046 597 aaKnown RBP15.91■□□□□ 0.14
NFKB1-201ENST00000226574 TMEM67Q5HYA8 995 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 AMOTL1Q8IY63 956 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 ALG1Q9BT22 464 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 DEF6Q9H4E7 631 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 TPCN1Q9ULQ1 816 aa15.91■□□□□ 0.14
NFKB1-201ENST00000226574 KIF2AO00139 706 aaPredicted RBP15.9■□□□□ 0.14
NFKB1-201ENST00000226574 ZSCAN12O43309 604 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 TXLNAP40222 546 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 EIF5P55010 431 aaKnown RBP15.9■□□□□ 0.14
NFKB1-201ENST00000226574 MTMR6Q9Y217 621 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 FLT4P35916 1363 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 PHACTR2O75167 634 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 LMAN1P49257 510 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 TANGO6Q9C0B7 1094 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 MAST1Q9Y2H9 1570 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 SPTLC2O15270 562 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 CCDC102BQ68D86 513 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 EAF2Q96CJ1 260 aaPredicted RBP15.9■□□□□ 0.14
NFKB1-201ENST00000226574 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
NFKB1-201ENST00000226574 NEMFO60524 1076 aa15.89■□□□□ 0.14
NFKB1-201ENST00000226574 LARGE1O95461 756 aa15.89■□□□□ 0.14
NFKB1-201ENST00000226574 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.14
NFKB1-201ENST00000226574 CEP89Q96ST8 783 aa15.89■□□□□ 0.14
NFKB1-201ENST00000226574 UTP14AQ9BVJ6 771 aaKnown RBP15.89■□□□□ 0.14
NFKB1-201ENST00000226574 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.14
NFKB1-201ENST00000226574 A0A0D9SFI3 127 aa15.89■□□□□ 0.13
NFKB1-201ENST00000226574 SLU7O95391 586 aaKnown RBP15.89■□□□□ 0.13
NFKB1-201ENST00000226574 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
NFKB1-201ENST00000226574 TSPYL1Q9H0U9 437 aa15.89■□□□□ 0.13
NFKB1-201ENST00000226574 ZNHIT6Q9NWK9 470 aaKnown RBP15.89■□□□□ 0.13
NFKB1-201ENST00000226574 DACH1Q9UI36 760 aa15.89■□□□□ 0.13
NFKB1-201ENST00000226574 ALDH1L1O75891 902 aa15.89■□□□□ 0.13
NFKB1-201ENST00000226574 RPS6KB1P23443 525 aa15.89■□□□□ 0.13
NFKB1-201ENST00000226574 ELF2Q15723 593 aa15.89■□□□□ 0.13
NFKB1-201ENST00000226574 JAKMIP3Q5VZ66 844 aa15.89■□□□□ 0.13
NFKB1-201ENST00000226574 EIF4G3O43432 1585 aaKnown RBP15.88■□□□□ 0.13
NFKB1-201ENST00000226574 PRC1O43663 620 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 PTPN21Q16825 1174 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 ZSCAN25Q6NSZ9 544 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 PAG1Q9NWQ8 432 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 ABCC2Q92887 1545 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 ERLIN1O75477 346 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms