RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ERBB3P21860 1342 aa17.67■□□□□ 0.42
UBE2D4-201ENST00000222402 FAM177BA6PVY3 158 aa17.67■□□□□ 0.42
UBE2D4-201ENST00000222402 LARGE1O95461 756 aa17.67■□□□□ 0.42
UBE2D4-201ENST00000222402 UQCRHLA0A096LP55 91 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 UQCRHP07919 91 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 KAT6BQ8WYB5 2073 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 TIMM10P62072 90 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 MCMDC2Q4G0Z9 681 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 Q6ZUG5 572 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 TM6SF1Q9BZW5 370 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 CNNM1Q9NRU3 951 aa17.66■□□□□ 0.42
UBE2D4-201ENST00000222402 HS1BP3Q53T59 392 aa17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 ZCRB1Q8TBF4 217 aaKnown RBP17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 ZSWIM6Q9HCJ5 1215 aa17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 KINO60870 393 aaKnown RBP17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 ME1P48163 572 aa17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 CFAP45Q9UL16 551 aa17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 MTX1Q13505 466 aa17.65■□□□□ 0.42
UBE2D4-201ENST00000222402 RPS6KB1P23443 525 aa17.64■□□□□ 0.42
UBE2D4-201ENST00000222402 TPCN1Q9ULQ1 816 aa17.64■□□□□ 0.42
UBE2D4-201ENST00000222402 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
UBE2D4-201ENST00000222402 IGKV5-2P06315 115 aa17.64■□□□□ 0.41
UBE2D4-201ENST00000222402 UVSSAQ2YD98 709 aa17.64■□□□□ 0.41
UBE2D4-201ENST00000222402 HAND2P61296 217 aa17.64■□□□□ 0.41
UBE2D4-201ENST00000222402 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
UBE2D4-201ENST00000222402 DACT1Q9NYF0 836 aa17.64■□□□□ 0.41
UBE2D4-201ENST00000222402 MTMR6Q9Y217 621 aa17.64■□□□□ 0.41
UBE2D4-201ENST00000222402 NRDCO43847 1150 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 A1BGP04217 495 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 SYNE3Q6ZMZ3 975 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 TTC12Q9H892 705 aaPredicted RBP17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 UBR1Q8IWV7 1749 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 CDC37L1Q7L3B6 337 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 SEC62Q99442 399 aaKnown RBP17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 OFD1O75665 1012 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 GPTP24298 496 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 MCM5P33992 734 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 MAP4K1Q92918 833 aa17.63■□□□□ 0.41
UBE2D4-201ENST00000222402 RIMS1Q86UR5 1692 aaKnown RBP17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 NFXL1Q6ZNB6 911 aa17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 PLBD2Q8NHP8 589 aa17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 ZNF396Q96N95 335 aaPredicted RBP17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 PAG1Q9NWQ8 432 aa17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 ADGRL3Q9HAR2 1447 aa17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 EPHA10Q5JZY3 1008 aa17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 HMGB1P09429 215 aaKnown RBP17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 CHST3Q7LGC8 479 aa17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 ZNF589Q86UQ0 364 aaPredicted RBP17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 DBNLQ9UJU6 430 aaKnown RBP17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 NPHP4O75161 1426 aaPredicted RBP17.62■□□□□ 0.41
UBE2D4-201ENST00000222402 METTL24Q5JXM2 366 aa17.61■□□□□ 0.41
UBE2D4-201ENST00000222402 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
UBE2D4-201ENST00000222402 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
UBE2D4-201ENST00000222402 STK38Q15208 465 aa17.61■□□□□ 0.41
UBE2D4-201ENST00000222402 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
UBE2D4-201ENST00000222402 TTC14Q96N46 770 aa17.61■□□□□ 0.41
UBE2D4-201ENST00000222402 CTNNA3Q9UI47 895 aa17.61■□□□□ 0.41
UBE2D4-201ENST00000222402 ATP5JP18859 108 aa17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 IFIT5Q13325 482 aaKnown RBP17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 IDH1O75874 414 aaKnown RBP17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 NECTIN1Q15223 517 aa17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 IMMTQ16891 758 aaKnown RBP17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 RAB11FIP4Q86YS3 637 aa17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 ZNF592Q92610 1267 aa17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 HSPA2P54652 639 aa17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
UBE2D4-201ENST00000222402 AKAP12Q02952 1782 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 JAK2O60674 1132 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 DDX19AQ9NUU7 478 aaKnown RBP17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 NPHP1O15259 732 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 RRP9O43818 475 aaKnown RBP17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 DHX16O60231 1041 aaKnown RBP17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 TPM3P06753 285 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 TPM4P67936 248 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 AKAP2Q9Y2D5 859 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 APOBRQ0VD83 1088 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 TTLL7Q6ZT98 887 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 COPRSQ9NQ92 184 aa17.59■□□□□ 0.41
UBE2D4-201ENST00000222402 HMGN5P82970 282 aaKnown RBP17.58■□□□□ 0.41
UBE2D4-201ENST00000222402 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.58■□□□□ 0.41
UBE2D4-201ENST00000222402 TBC1D2BQ9UPU7 963 aa17.58■□□□□ 0.41
UBE2D4-201ENST00000222402 STARD3NLO95772 234 aa17.58■□□□□ 0.4
UBE2D4-201ENST00000222402 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.4
UBE2D4-201ENST00000222402 TRIM29Q14134 588 aa17.58■□□□□ 0.4
UBE2D4-201ENST00000222402 KNDC1Q76NI1 1749 aa17.57■□□□□ 0.4
UBE2D4-201ENST00000222402 TAF5LO75529 589 aa17.57■□□□□ 0.4
UBE2D4-201ENST00000222402 HSP90AB3PQ58FF7 597 aa17.57■□□□□ 0.4
UBE2D4-201ENST00000222402 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
UBE2D4-201ENST00000222402 PTPN12Q05209 780 aaKnown RBP17.57■□□□□ 0.4
UBE2D4-201ENST00000222402 LDHAL6AQ6ZMR3 332 aa17.57■□□□□ 0.4
UBE2D4-201ENST00000222402 NCAPD2Q15021 1401 aa17.57■□□□□ 0.4
UBE2D4-201ENST00000222402 A0A1B0GUL7 405 aa17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 ZNF165P49910 485 aa17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 STK11IPQ8N1F8 1099 aa17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 CYP27B1O15528 508 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms