RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TPD52L1Q16890 204 aaPredicted RBP15.98■□□□□ 0.15
RAB3D-201ENST00000222120 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.15
RAB3D-201ENST00000222120 APOBRQ0VD83 1088 aa15.98■□□□□ 0.15
RAB3D-201ENST00000222120 NPHP3Q7Z494 1330 aa15.98■□□□□ 0.15
RAB3D-201ENST00000222120 ERICH2A1L162 156 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 TNNI3KQ59H18 835 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 FAM89AQ96GI7 184 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 FPGT-TNNI3KV9GXZ4 949 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 CRB1P82279 1406 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 DHX16O60231 1041 aaKnown RBP15.97■□□□□ 0.15
RAB3D-201ENST00000222120 NUP133Q8WUM0 1156 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 LSG1Q9H089 658 aaKnown RBP15.97■□□□□ 0.15
RAB3D-201ENST00000222120 ABCF2Q9UG63 623 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 CTNNA3Q9UI47 895 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 PAG1Q9NWQ8 432 aa15.97■□□□□ 0.15
RAB3D-201ENST00000222120 HELBQ8NG08 1087 aaPredicted RBP15.97■□□□□ 0.15
RAB3D-201ENST00000222120 MAP2P11137 1827 aaKnown RBP15.96■□□□□ 0.15
RAB3D-201ENST00000222120 AOX1Q06278 1338 aa15.96■□□□□ 0.15
RAB3D-201ENST00000222120 PES1O00541 588 aaKnown RBP15.96■□□□□ 0.15
RAB3D-201ENST00000222120 ISM2Q6H9L7 571 aa15.96■□□□□ 0.15
RAB3D-201ENST00000222120 PI4K2BQ8TCG2 481 aa15.96■□□□□ 0.15
RAB3D-201ENST00000222120 BIN1O00499 593 aa15.96■□□□□ 0.15
RAB3D-201ENST00000222120 JAK2O60674 1132 aa15.96■□□□□ 0.15
RAB3D-201ENST00000222120 HOMER1Q86YM7 354 aa15.96■□□□□ 0.15
RAB3D-201ENST00000222120 HMG20BQ9P0W2 317 aa15.96■□□□□ 0.15
RAB3D-201ENST00000222120 GOLGA8BA8MQT2 603 aa15.96■□□□□ 0.14
RAB3D-201ENST00000222120 LARGE1O95461 756 aa15.96■□□□□ 0.14
RAB3D-201ENST00000222120 CDK11BP21127 795 aaKnown RBP15.96■□□□□ 0.14
RAB3D-201ENST00000222120 SAFBQ15424 915 aaKnown RBP eCLIP15.96■□□□□ 0.14
RAB3D-201ENST00000222120 C17orf53Q8N3J3 647 aaPredicted RBP15.96■□□□□ 0.14
RAB3D-201ENST00000222120 IL25Q9H293 177 aa15.96■□□□□ 0.14
RAB3D-201ENST00000222120 ZKSCAN5Q9Y2L8 839 aa15.96■□□□□ 0.14
RAB3D-201ENST00000222120 ZDHHC9Q9Y397 364 aa15.96■□□□□ 0.14
RAB3D-201ENST00000222120 ADAMTS2O95450 1211 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 ZNF165P49910 485 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 CDC37L1Q7L3B6 337 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 NCOA5Q9HCD5 579 aaKnown RBP15.95■□□□□ 0.14
RAB3D-201ENST00000222120 ATP10DQ9P241 1426 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 AIDAQ96BJ3 306 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 C8orf76Q96K31 380 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 TMEM131LA2VDJ0 1609 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 PREX1Q8TCU6 1659 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 ZNF213O14771 459 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 TTLL7Q6ZT98 887 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 AKAP2Q9Y2D5 859 aa15.95■□□□□ 0.14
RAB3D-201ENST00000222120 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 TPCN1Q9ULQ1 816 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 IQSEC3Q9UPP2 1182 aaPredicted RBP15.94■□□□□ 0.14
RAB3D-201ENST00000222120 PHKG2P15735 406 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 ADAMTS13Q76LX8 1427 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 FSIP1Q8NA03 581 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 TDO2P48775 406 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 ANO6Q4KMQ2 910 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 MAP7D2Q96T17 732 aa15.94■□□□□ 0.14
RAB3D-201ENST00000222120 NEURL4Q96JN8 1562 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 SASH1O94885 1247 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 CCAR2Q8N163 923 aaKnown RBP15.93■□□□□ 0.14
RAB3D-201ENST00000222120 NAT10Q9H0A0 1025 aaKnown RBP15.93■□□□□ 0.14
RAB3D-201ENST00000222120 RPS6KB1P23443 525 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 LUZP1Q86V48 1076 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 MICU3Q86XE3 530 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 LRP2BPQ9P2M1 347 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 IL15P40933 162 aaPredicted RBP15.93■□□□□ 0.14
RAB3D-201ENST00000222120 POLA2Q14181 598 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 DNAJC25Q9H1X3 360 aa15.93■□□□□ 0.14
RAB3D-201ENST00000222120 ORC3Q9UBD5 711 aaPredicted RBP15.93■□□□□ 0.14
RAB3D-201ENST00000222120 ZNF589Q86UQ0 364 aaPredicted RBP15.92■□□□□ 0.14
RAB3D-201ENST00000222120 CCAR1Q8IX12 1150 aaKnown RBP15.92■□□□□ 0.14
RAB3D-201ENST00000222120 OVOS2A0A0J9YW53 1432 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 OVOS2Q6IE36 1432 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 A0A1B0GUL7 405 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 RXRAP19793 462 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 KLF18A0A0U1RQI7 1052 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 HMGB1P09429 215 aaKnown RBP15.92■□□□□ 0.14
RAB3D-201ENST00000222120 CUL4AQ13619 759 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 EPHA10Q5JZY3 1008 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.92■□□□□ 0.14
RAB3D-201ENST00000222120 KDRP35968 1356 aa15.92■□□□□ 0.14
RAB3D-201ENST00000222120 A0A0U1RQG5 324 aaPredicted RBP15.91■□□□□ 0.14
RAB3D-201ENST00000222120 MINDY4BA8MYZ0 360 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 OTUD7BQ6GQQ9 843 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 PDILTQ8N807 584 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 ERBB4Q15303 1308 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 USP31Q70CQ4 1352 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 SLFNL1Q499Z3 407 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 PDCL3Q9H2J4 239 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 HMGN5P82970 282 aaKnown RBP15.91■□□□□ 0.14
RAB3D-201ENST00000222120 PLBD2Q8NHP8 589 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 CCDC34Q96HJ3 373 aa15.91■□□□□ 0.14
RAB3D-201ENST00000222120 C16orf45Q96MC5 204 aaPredicted RBP15.91■□□□□ 0.14
RAB3D-201ENST00000222120 DBNLQ9UJU6 430 aaKnown RBP15.91■□□□□ 0.14
RAB3D-201ENST00000222120 ANKRD18BA2A2Z9 1011 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 CCDC69A6NI79 296 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 DDX19AQ9NUU7 478 aaKnown RBP15.9■□□□□ 0.14
RAB3D-201ENST00000222120 TYRO3Q06418 890 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 SART3Q15020 963 aaKnown RBP15.9■□□□□ 0.14
RAB3D-201ENST00000222120 ATP2B3Q16720 1220 aa15.9■□□□□ 0.14
RAB3D-201ENST00000222120 CEP57L1Q8IYX8 460 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms