RNA–Protein interactions for RNA: ENST00000221573.10

SNAPC2-201, Transcript of small nuclear RNA activating complex polypeptide 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC2-201ENST00000221573 CRY2Q49AN0 593 aa24.42■■□□□ 1.5
SNAPC2-201ENST00000221573 C2CD5Q86YS7 1000 aa24.42■■□□□ 1.5
SNAPC2-201ENST00000221573 NLGN2Q8NFZ4 835 aa24.42■■□□□ 1.5
SNAPC2-201ENST00000221573 SPEF2Q9C093 1822 aa24.42■■□□□ 1.5
SNAPC2-201ENST00000221573 TTLL11Q8NHH1 800 aa24.41■■□□□ 1.5
SNAPC2-201ENST00000221573 GNAI2P04899 355 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 SF3B3Q15393 1217 aaKnown RBP24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 ANKRD44Q8N8A2 993 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 ZBTB40Q9NUA8 1239 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 A0A0G2JLW4 131 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 SRGNP10124 158 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 DPEP1P16444 411 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 TGFB2P61812 414 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 LMBR1LQ6UX01 489 aa24.4■■□□□ 1.5
SNAPC2-201ENST00000221573 H0YIN7 160 aa24.39■■□□□ 1.49
SNAPC2-201ENST00000221573 CSF1RP07333 972 aa24.39■■□□□ 1.49
SNAPC2-201ENST00000221573 FAM161AQ3B820 660 aa24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 RABL6Q3YEC7 729 aaPredicted RBP24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 CCDC152Q4G0S7 254 aa24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 EXOC6Q8TAG9 804 aa24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 RPGRQ92834 1020 aaKnown RBP24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 SYT17Q9BSW7 474 aa24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 GREM2Q9H772 168 aa24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 CHMP3Q9Y3E7 222 aa24.38■■□□□ 1.49
SNAPC2-201ENST00000221573 KCNA3P22001 575 aa24.37■■□□□ 1.49
SNAPC2-201ENST00000221573 HDAC5Q9UQL6 1122 aa24.37■■□□□ 1.49
SNAPC2-201ENST00000221573 NPR1P16066 1061 aa24.36■■□□□ 1.49
SNAPC2-201ENST00000221573 ZNF622Q969S3 477 aaKnown RBP eCLIP24.36■■□□□ 1.49
SNAPC2-201ENST00000221573 MASTLQ96GX5 879 aa24.36■■□□□ 1.49
SNAPC2-201ENST00000221573 CHMP4BQ9H444 224 aaKnown RBP24.36■■□□□ 1.49
SNAPC2-201ENST00000221573 SEC31BQ9NQW1 1179 aa24.36■■□□□ 1.49
SNAPC2-201ENST00000221573 PDZRN3Q9UPQ7 1066 aa24.36■■□□□ 1.49
SNAPC2-201ENST00000221573 SLX4Q8IY92 1834 aa24.36■■□□□ 1.49
SNAPC2-201ENST00000221573 WWC3Q9ULE0 1092 aa24.35■■□□□ 1.49
SNAPC2-201ENST00000221573 RTL9Q8NET4 1388 aa24.35■■□□□ 1.49
SNAPC2-201ENST00000221573 HOXA10P31260 410 aaPredicted RBP24.35■■□□□ 1.49
SNAPC2-201ENST00000221573 ITGA6P23229 1130 aa24.34■■□□□ 1.49
SNAPC2-201ENST00000221573 STYK1Q6J9G0 422 aa24.34■■□□□ 1.49
SNAPC2-201ENST00000221573 DDX46Q7L014 1031 aaKnown RBP24.34■■□□□ 1.49
SNAPC2-201ENST00000221573 RBM17Q96I25 401 aaKnown RBP24.34■■□□□ 1.49
SNAPC2-201ENST00000221573 CELF1Q92879 486 aaKnown RBP24.32■■□□□ 1.48
SNAPC2-201ENST00000221573 MTX1Q13505 466 aa24.31■■□□□ 1.48
SNAPC2-201ENST00000221573 CEP85Q6P2H3 762 aa24.31■■□□□ 1.48
SNAPC2-201ENST00000221573 CRAMP1Q96RY5 1269 aa24.31■■□□□ 1.48
SNAPC2-201ENST00000221573 PNMA6EA0A0J9YXQ4 647 aa24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 IFIT5Q13325 482 aaKnown RBP24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 GRAPQ13588 217 aa24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 GRAPLQ8TC17 118 aaPredicted RBP24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 ARFGEF1Q9Y6D6 1849 aa24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 ANKRD18BA2A2Z9 1011 aa24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 CCDC57Q2TAC2 916 aa24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 SLC51AQ86UW1 340 aa24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 ZNF594Q96JF6 807 aaPredicted RBP24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 PIM2Q9P1W9 311 aa24.3■■□□□ 1.48
SNAPC2-201ENST00000221573 GOLGB1Q14789 3259 aaKnown RBP24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 SRGAP3O43295 1099 aa24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 ALDH1B1P30837 517 aa24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 RFX5P48382 616 aaPredicted RBP24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 PRPF40BQ6NWY9 871 aaKnown RBP24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 KLHDC4Q8TBB5 520 aa24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 CNKSR1Q969H4 720 aa24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 LRRC37AA6NMS7 1700 aa24.29■■□□□ 1.48
SNAPC2-201ENST00000221573 A0A1B0GUL6 1792 aa24.28■■□□□ 1.48
SNAPC2-201ENST00000221573 ATP8B2P98198 1209 aa24.28■■□□□ 1.48
SNAPC2-201ENST00000221573 TTLL6Q8N841 843 aa24.28■■□□□ 1.48
SNAPC2-201ENST00000221573 CDC5LQ99459 802 aaKnown RBP24.28■■□□□ 1.48
SNAPC2-201ENST00000221573 ANKRD18AQ8IVF6 992 aa24.27■■□□□ 1.48
SNAPC2-201ENST00000221573 PCDHB15Q9Y5E8 787 aa24.27■■□□□ 1.48
SNAPC2-201ENST00000221573 RPS8P62241 208 aaKnown RBP24.26■■□□□ 1.47
SNAPC2-201ENST00000221573 SIRT2Q8IXJ6 389 aa24.26■■□□□ 1.47
SNAPC2-201ENST00000221573 PPEF1O14829 653 aaPredicted RBP24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 NEFLP07196 543 aa24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 TAF7LQ5H9L4 462 aa24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 PA2G4Q9UQ80 394 aaKnown RBP24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 PTPN12Q05209 780 aaKnown RBP24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 POLA2Q14181 598 aa24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 DALRD3Q5D0E6 543 aaKnown RBP24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 RPAP2Q8IXW5 612 aaPredicted RBP24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 SSH3Q8TE77 659 aa24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 ZNF219Q9P2Y4 722 aaPredicted RBP24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 BCS1LQ9Y276 419 aa24.25■■□□□ 1.47
SNAPC2-201ENST00000221573 IGHMBP2P38935 993 aaKnown RBP24.24■■□□□ 1.47
SNAPC2-201ENST00000221573 OLFM4Q6UX06 510 aa24.24■■□□□ 1.47
SNAPC2-201ENST00000221573 BBOX1O75936 387 aa24.23■■□□□ 1.47
SNAPC2-201ENST00000221573 AAMPQ13685 434 aa24.23■■□□□ 1.47
SNAPC2-201ENST00000221573 PUS3Q9BZE2 481 aaKnown RBP24.23■■□□□ 1.47
SNAPC2-201ENST00000221573 MPHOSPH8Q99549 860 aa24.22■■□□□ 1.47
SNAPC2-201ENST00000221573 SIL1Q9H173 461 aa24.22■■□□□ 1.47
SNAPC2-201ENST00000221573 C21orf2O43822 256 aa24.21■■□□□ 1.47
SNAPC2-201ENST00000221573 C7orf43Q8WVR3 580 aa24.21■■□□□ 1.47
SNAPC2-201ENST00000221573 BSDC1Q9NW68 430 aaPredicted RBP24.21■■□□□ 1.47
SNAPC2-201ENST00000221573 LTBP1Q14766 1721 aa24.21■■□□□ 1.47
SNAPC2-201ENST00000221573 LRRC24Q50LG9 513 aa24.2■■□□□ 1.47
SNAPC2-201ENST00000221573 LDHAL6AQ6ZMR3 332 aa24.2■■□□□ 1.47
SNAPC2-201ENST00000221573 COPRSQ9NQ92 184 aa24.2■■□□□ 1.47
SNAPC2-201ENST00000221573 FER1L6Q2WGJ9 1857 aa24.2■■□□□ 1.46
SNAPC2-201ENST00000221573 PELP1Q8IZL8 1130 aaKnown RBP24.2■■□□□ 1.46
SNAPC2-201ENST00000221573 CNNM1Q9NRU3 951 aa24.2■■□□□ 1.46
SNAPC2-201ENST00000221573 ATP6V0A2Q9Y487 856 aa24.2■■□□□ 1.46
SNAPC2-201ENST00000221573 TMC4Q7Z404 712 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms