RNA–Protein interactions for RNA: ENST00000220659.10

BRF2-201, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF2, Length 2,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-201ENST00000220659 SNX14Q9Y5W7 946 aa15.19■□□□□ 0.02
BRF2-201ENST00000220659 NUP98P52948 1817 aa15.19■□□□□ 0.02
BRF2-201ENST00000220659 NMIQ13287 307 aaPredicted RBP15.19■□□□□ 0.02
BRF2-201ENST00000220659 CCDC57Q2TAC2 916 aa15.19■□□□□ 0.02
BRF2-201ENST00000220659 CLEC17AQ6ZS10 378 aa15.19■□□□□ 0.02
BRF2-201ENST00000220659 TNPO1Q92973 898 aaKnown RBP15.19■□□□□ 0.02
BRF2-201ENST00000220659 ZNF609O15014 1411 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 LOC102724428A0A0B4J2F2 783 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 SIK1P57059 783 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 CUL4AQ13619 759 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 LRRC24Q50LG9 513 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 FSD1Q9BTV5 496 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 CCDC87Q9NVE4 849 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 ZNF831Q5JPB2 1677 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 FAM98CQ17RN3 349 aaKnown RBP15.18■□□□□ 0.02
BRF2-201ENST00000220659 DZIP3Q86Y13 1208 aaKnown RBP15.18■□□□□ 0.02
BRF2-201ENST00000220659 ZNF34Q8IZ26 560 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 SMARCC1Q92922 1105 aaPredicted RBP15.18■□□□□ 0.02
BRF2-201ENST00000220659 TMX3Q96JJ7 454 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 MED23Q9ULK4 1368 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 CCDC171Q6TFL3 1326 aa15.18■□□□□ 0.02
BRF2-201ENST00000220659 PTH1RQ03431 593 aa15.17■□□□□ 0.02
BRF2-201ENST00000220659 FNBP4Q8N3X1 1017 aaPredicted RBP15.17■□□□□ 0.02
BRF2-201ENST00000220659 ZNF594Q96JF6 807 aaPredicted RBP15.17■□□□□ 0.02
BRF2-201ENST00000220659 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
BRF2-201ENST00000220659 MAP4K1Q92918 833 aa15.17■□□□□ 0.02
BRF2-201ENST00000220659 DDX11L8A8MPP1 907 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 ATP6V1AP38606 617 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 NUCB2P80303 420 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 RASEFQ8IZ41 740 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.16■□□□□ 0.02
BRF2-201ENST00000220659 PALLDQ8WX93 1383 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 A0A0D9SFI3 127 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 CYP2E1P05181 493 aaPredicted RBP15.16■□□□□ 0.02
BRF2-201ENST00000220659 GPTP24298 496 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 CRKLP46109 303 aaKnown RBP15.16■□□□□ 0.02
BRF2-201ENST00000220659 INTS4Q96HW7 963 aaKnown RBP15.16■□□□□ 0.02
BRF2-201ENST00000220659 PUS3Q9BZE2 481 aaKnown RBP15.16■□□□□ 0.02
BRF2-201ENST00000220659 TM6SF1Q9BZW5 370 aa15.16■□□□□ 0.02
BRF2-201ENST00000220659 IFIT5Q13325 482 aaKnown RBP15.15■□□□□ 0.02
BRF2-201ENST00000220659 ITPK1Q13572 414 aa15.15■□□□□ 0.02
BRF2-201ENST00000220659 TTLL11Q8NHH1 800 aa15.15■□□□□ 0.02
BRF2-201ENST00000220659 AK7Q96M32 723 aa15.15■□□□□ 0.02
BRF2-201ENST00000220659 TTC14Q96N46 770 aa15.15■□□□□ 0.02
BRF2-201ENST00000220659 GBP4Q96PP9 640 aa15.15■□□□□ 0.02
BRF2-201ENST00000220659 CEP126Q9P2H0 1117 aa15.15■□□□□ 0.02
BRF2-201ENST00000220659 TBC1D2BQ9UPU7 963 aa15.15■□□□□ 0.02
BRF2-201ENST00000220659 GOLGB1Q14789 3259 aaKnown RBP15.15■□□□□ 0.02
BRF2-201ENST00000220659 CTSWP56202 376 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 KCNQ4P56696 695 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 PTF1AQ7RTS3 328 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 UPF3BQ9BZI7 483 aaKnown RBP15.14■□□□□ 0.01
BRF2-201ENST00000220659 AKAP2Q9Y2D5 859 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 SPATA31A6Q5VVP1 1343 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 MYH3P11055 1940 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 SPEF2Q9C093 1822 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 A0A1B0GUL7 405 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 IRS4O14654 1257 aaPredicted RBP15.14■□□□□ 0.01
BRF2-201ENST00000220659 KCNQ2O43526 872 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 TIMM10P62072 90 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 EDC3Q96F86 508 aaKnown RBP15.14■□□□□ 0.01
BRF2-201ENST00000220659 NEUROD6Q96NK8 337 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 UBN2Q6ZU65 1347 aa15.14■□□□□ 0.01
BRF2-201ENST00000220659 SYNE4Q8N205 404 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 ZGPATQ8N5A5 531 aaKnown RBP15.13■□□□□ 0.01
BRF2-201ENST00000220659 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 TRMT112Q9UI30 125 aaKnown RBP15.13■□□□□ 0.01
BRF2-201ENST00000220659 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
BRF2-201ENST00000220659 PDE8AO60658 829 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 SSFA2P28290 1259 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
BRF2-201ENST00000220659 RIPOR2Q9Y4F9 1068 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 RBM8AQ9Y5S9 174 aaKnown RBP15.13■□□□□ 0.01
BRF2-201ENST00000220659 MYH14Q7Z406 1995 aaKnown RBP15.13■□□□□ 0.01
BRF2-201ENST00000220659 CAMTA2O94983 1202 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 PTMSP20962 102 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 ZSWIM6Q9HCJ5 1215 aa15.13■□□□□ 0.01
BRF2-201ENST00000220659 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 DNAJC2Q99543 621 aaKnown RBP15.12■□□□□ 0.01
BRF2-201ENST00000220659 GREM2Q9H772 168 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 ANKRD18BA2A2Z9 1011 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 TAF5LO75529 589 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 ZKSCAN1P17029 563 aaPredicted RBP15.12■□□□□ 0.01
BRF2-201ENST00000220659 ITGA6P23229 1130 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 TSGA10IPQ3SY00 556 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 TAF7LQ5H9L4 462 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 USPL1Q5W0Q7 1092 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 PAG1Q9NWQ8 432 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 SH3TC1Q8TE82 1336 aa15.12■□□□□ 0.01
BRF2-201ENST00000220659 RIC1Q4ADV7 1423 aa15.11■□□□□ 0.01
BRF2-201ENST00000220659 PARP10Q53GL7 1025 aa15.11■□□□□ 0.01
BRF2-201ENST00000220659 ZNF589Q86UQ0 364 aaPredicted RBP15.11■□□□□ 0.01
BRF2-201ENST00000220659 THSD7AQ9UPZ6 1657 aa15.11■□□□□ 0.01
BRF2-201ENST00000220659 SLC27A2O14975 620 aa15.11■□□□□ 0.01
BRF2-201ENST00000220659 VPS53Q5VIR6 699 aa15.11■□□□□ 0.01
BRF2-201ENST00000220659 LRP5O75197 1615 aa15.1■□□□□ 0.01
BRF2-201ENST00000220659 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
BRF2-201ENST00000220659 RPAP1Q9BWH6 1393 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms