RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 PHACTR2O75167 634 aa17.14■□□□□ 0.33
NDFIP2-201ENST00000218652 SYCP3Q8IZU3 236 aa17.14■□□□□ 0.33
NDFIP2-201ENST00000218652 STAMBPO95630 424 aa17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 PUF60Q9UHX1 559 aaKnown RBP17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 ZBTB43O43298 467 aa17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 FAM114A1Q8IWE2 563 aa17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 SYT1P21579 422 aa17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 SRRTQ9BXP5 876 aaKnown RBP17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
NDFIP2-201ENST00000218652 DHX29Q7Z478 1369 aaKnown RBP17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 IQSEC3Q9UPP2 1182 aaPredicted RBP17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 EHBP1Q8NDI1 1231 aa17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 SAMM50Q9Y512 469 aa17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 MAPKBP1O60336 1514 aa17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 SLU7O95391 586 aaKnown RBP17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 CYLC1P35663 651 aaPredicted RBP17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 CEP63Q96MT8 703 aa17.12■□□□□ 0.33
NDFIP2-201ENST00000218652 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 HSF2BPO75031 334 aa17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 PDE4BQ07343 736 aa17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 WTAPQ15007 396 aa17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 TTF1Q15361 905 aaPredicted RBP17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 CWC25Q9NXE8 425 aaPredicted RBP17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 ANKRD13DQ6ZTN6 518 aa17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 F13A1P00488 732 aa17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 IDI1Q13907 227 aa17.11■□□□□ 0.33
NDFIP2-201ENST00000218652 CAPN2P17655 700 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 ACTN2P35609 894 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 EXOC1Q9NV70 894 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 ANKRD44Q8N8A2 993 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 TNNQ9UQP3 1299 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 TYRO3Q06418 890 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 PLEKHH2Q8IVE3 1493 aa17.1■□□□□ 0.33
NDFIP2-201ENST00000218652 FEZ1Q99689 392 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 PYM1Q9BRP8 204 aaKnown RBP17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 HSPA4P34932 840 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 ARID5AQ03989 594 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 SPAG1Q07617 926 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 GIGYF2Q6Y7W6 1299 aaKnown RBP17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 Q6ZUG5 572 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 PSMD1Q99460 953 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 STX17P56962 302 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 COMMD10Q9Y6G5 202 aa17.09■□□□□ 0.33
NDFIP2-201ENST00000218652 LDHCP07864 332 aa17.08■□□□□ 0.33
NDFIP2-201ENST00000218652 ARHGAP45Q92619 1136 aa17.08■□□□□ 0.33
NDFIP2-201ENST00000218652 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.33
NDFIP2-201ENST00000218652 CKAP4Q07065 602 aaKnown RBP17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 BBXQ8WY36 941 aaPredicted RBP17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 IKBKGQ9Y6K9 419 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 CHST3Q7LGC8 479 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 PPP1R14CQ8TAE6 165 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 PAIP2Q9BPZ3 127 aaKnown RBP17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 ADAMTS2O95450 1211 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 KARSQ15046 597 aaKnown RBP17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 LZTFL1Q9NQ48 299 aa17.08■□□□□ 0.32
NDFIP2-201ENST00000218652 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 A0A1W2PRG0 241 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 PSMA7O14818 248 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 STAT6P42226 847 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 DNAJC21Q5F1R6 531 aaKnown RBP17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 SPTLC2O15270 562 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 BAG3O95817 575 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 FBXO31Q5XUX0 539 aaPredicted RBP17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 C8orf58Q8NAV2 365 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 CDC5LQ99459 802 aaKnown RBP17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 TBCAO75347 108 aaKnown RBP17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 CCDC174Q6PII3 467 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 LMBR1LQ6UX01 489 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 DHX58Q96C10 678 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 CTAGE1Q96RT6 745 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
NDFIP2-201ENST00000218652 CCDC6Q16204 474 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 STXBP4Q6ZWJ1 553 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 SNX21Q969T3 373 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 PA2G4Q9UQ80 394 aaKnown RBP17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 NCOA1Q15788 1441 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 TACC1O75410 805 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 MYCNP04198 464 aaPredicted RBP17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 ASIC1P78348 528 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 IFI16Q16666 785 aaKnown RBP17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 RTN1Q16799 776 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 RPGRQ92834 1020 aaKnown RBP17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 PRXQ9BXM0 1461 aa17.06■□□□□ 0.32
NDFIP2-201ENST00000218652 KIF5AQ12840 1032 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms