RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 FAM161AQ3B820 660 aa14.02□□□□□ -0.16
CDKL1-201ENST00000216378 NAP1L5Q96NT1 182 aaPredicted RBP14.02□□□□□ -0.16
CDKL1-201ENST00000216378 ANKRD36CQ5JPF3 1778 aa14.02□□□□□ -0.17
CDKL1-201ENST00000216378 DDX58O95786 925 aaKnown RBP14.02□□□□□ -0.17
CDKL1-201ENST00000216378 DPEP1P16444 411 aa14.02□□□□□ -0.17
CDKL1-201ENST00000216378 OLFM4Q6UX06 510 aa14.02□□□□□ -0.17
CDKL1-201ENST00000216378 API5Q9BZZ5 524 aaKnown RBP14.02□□□□□ -0.17
CDKL1-201ENST00000216378 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.17
CDKL1-201ENST00000216378 NRXN2Q9P2S2 1712 aa14.02□□□□□ -0.17
CDKL1-201ENST00000216378 CACNA1FO60840 1977 aa14.01□□□□□ -0.17
CDKL1-201ENST00000216378 GCKRQ14397 625 aa14.01□□□□□ -0.17
CDKL1-201ENST00000216378 EPHA10Q5JZY3 1008 aa14.01□□□□□ -0.17
CDKL1-201ENST00000216378 UBE3BQ7Z3V4 1068 aa14.01□□□□□ -0.17
CDKL1-201ENST00000216378 ARHGAP45Q92619 1136 aa14.01□□□□□ -0.17
CDKL1-201ENST00000216378 CHMP4BQ9H444 224 aaKnown RBP14.01□□□□□ -0.17
CDKL1-201ENST00000216378 TAF1P21675 1872 aa14.01□□□□□ -0.17
CDKL1-201ENST00000216378 C10orf71Q711Q0 1435 aa14.01□□□□□ -0.17
CDKL1-201ENST00000216378 HMGB2P26583 209 aaKnown RBP14□□□□□ -0.17
CDKL1-201ENST00000216378 CASP7P55210 303 aa14□□□□□ -0.17
CDKL1-201ENST00000216378 ANKRD45Q5TZF3 282 aa14□□□□□ -0.17
CDKL1-201ENST00000216378 POTEDQ86YR6 584 aa14□□□□□ -0.17
CDKL1-201ENST00000216378 UTP14AQ9BVJ6 771 aaKnown RBP14□□□□□ -0.17
CDKL1-201ENST00000216378 NPHP1O15259 732 aa14□□□□□ -0.17
CDKL1-201ENST00000216378 KAZALD1Q96I82 304 aa14□□□□□ -0.17
CDKL1-201ENST00000216378 PXDNLA1KZ92 1463 aa14□□□□□ -0.17
CDKL1-201ENST00000216378 PTPRCP08575 1304 aa13.99□□□□□ -0.17
CDKL1-201ENST00000216378 KIAA1551Q9HCM1 1747 aa13.99□□□□□ -0.17
CDKL1-201ENST00000216378 HDAC1Q13547 482 aaPredicted RBP13.99□□□□□ -0.17
CDKL1-201ENST00000216378 CWC25Q9NXE8 425 aaPredicted RBP13.99□□□□□ -0.17
CDKL1-201ENST00000216378 LRP5O75197 1615 aa13.99□□□□□ -0.17
CDKL1-201ENST00000216378 COL11A2P13942 1736 aaPredicted RBP13.99□□□□□ -0.17
CDKL1-201ENST00000216378 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
CDKL1-201ENST00000216378 TPTE2Q6XPS3 522 aa13.99□□□□□ -0.17
CDKL1-201ENST00000216378 LINS1Q8NG48 757 aa13.99□□□□□ -0.17
CDKL1-201ENST00000216378 USP44Q9H0E7 712 aa13.99□□□□□ -0.17
CDKL1-201ENST00000216378 RRAGDQ9NQL2 400 aaPredicted RBP13.99□□□□□ -0.17
CDKL1-201ENST00000216378 IRS4O14654 1257 aaPredicted RBP13.98□□□□□ -0.17
CDKL1-201ENST00000216378 C16orf71Q8IYS4 520 aaPredicted RBP13.98□□□□□ -0.17
CDKL1-201ENST00000216378 CCDC191Q8NCU4 936 aa13.98□□□□□ -0.17
CDKL1-201ENST00000216378 ZNF219Q9P2Y4 722 aaPredicted RBP13.98□□□□□ -0.17
CDKL1-201ENST00000216378 H7C1W4 665 aa13.97□□□□□ -0.17
CDKL1-201ENST00000216378 SMARCA5O60264 1052 aaPredicted RBP13.97□□□□□ -0.17
CDKL1-201ENST00000216378 HSP90AB3PQ58FF7 597 aa13.97□□□□□ -0.17
CDKL1-201ENST00000216378 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
CDKL1-201ENST00000216378 CHMP4AQ9BY43 222 aa13.97□□□□□ -0.17
CDKL1-201ENST00000216378 SRCIN1Q9C0H9 1055 aa13.97□□□□□ -0.17
CDKL1-201ENST00000216378 DDX60Q8IY21 1712 aaKnown RBP13.97□□□□□ -0.17
CDKL1-201ENST00000216378 SH3TC1Q8TE82 1336 aa13.97□□□□□ -0.17
CDKL1-201ENST00000216378 YBX3P16989 372 aaKnown RBP eCLIP13.96□□□□□ -0.17
CDKL1-201ENST00000216378 NEXNQ0ZGT2 675 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 PARP10Q53GL7 1025 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 PPP1R42Q7Z4L9 355 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 C2CD5Q86YS7 1000 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 SEC31BQ9NQW1 1179 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 INTS3Q68E01 1043 aaKnown RBP13.96□□□□□ -0.17
CDKL1-201ENST00000216378 SMC5Q8IY18 1101 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 SUCLG2Q96I99 432 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 BRIP1Q9BX63 1249 aa13.96□□□□□ -0.17
CDKL1-201ENST00000216378 WTIPA6NIX2 430 aaPredicted RBP13.95□□□□□ -0.18
CDKL1-201ENST00000216378 SRGNP10124 158 aa13.95□□□□□ -0.18
CDKL1-201ENST00000216378 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
CDKL1-201ENST00000216378 KIF13BQ9NQT8 1826 aa13.95□□□□□ -0.18
CDKL1-201ENST00000216378 GRM8O00222 908 aa13.95□□□□□ -0.18
CDKL1-201ENST00000216378 RGL2O15211 777 aa13.95□□□□□ -0.18
CDKL1-201ENST00000216378 PCCAP05165 728 aaPredicted RBP13.95□□□□□ -0.18
CDKL1-201ENST00000216378 OTUD7AQ8TE49 926 aaPredicted RBP13.95□□□□□ -0.18
CDKL1-201ENST00000216378 ZNF622Q969S3 477 aaKnown RBP eCLIP13.95□□□□□ -0.18
CDKL1-201ENST00000216378 CD2APQ9Y5K6 639 aa13.95□□□□□ -0.18
CDKL1-201ENST00000216378 ST5P78524 1137 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 LAMB2P55268 1798 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 FOXO4P98177 505 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 NUCB1Q02818 461 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 SLC10A5Q5PT55 438 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 CHD1LQ86WJ1 897 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 GREM2Q9H772 168 aa13.94□□□□□ -0.18
CDKL1-201ENST00000216378 KLRG2A4D1S0 409 aaPredicted RBP13.93□□□□□ -0.18
CDKL1-201ENST00000216378 CRY2Q49AN0 593 aa13.93□□□□□ -0.18
CDKL1-201ENST00000216378 CELF1Q92879 486 aaKnown RBP13.93□□□□□ -0.18
CDKL1-201ENST00000216378 NYXQ9GZU5 481 aa13.93□□□□□ -0.18
CDKL1-201ENST00000216378 C9orf78Q9NZ63 289 aaPredicted RBP13.93□□□□□ -0.18
CDKL1-201ENST00000216378 CEP85Q6P2H3 762 aa13.92□□□□□ -0.18
CDKL1-201ENST00000216378 TTLL11Q8NHH1 800 aa13.92□□□□□ -0.18
CDKL1-201ENST00000216378 BICC1Q9H694 974 aaKnown RBP13.92□□□□□ -0.18
CDKL1-201ENST00000216378 SLX4Q8IY92 1834 aa13.92□□□□□ -0.18
CDKL1-201ENST00000216378 ANKRD44Q8N8A2 993 aa13.92□□□□□ -0.18
CDKL1-201ENST00000216378 ZNF594Q96JF6 807 aaPredicted RBP13.92□□□□□ -0.18
CDKL1-201ENST00000216378 PDCL3Q9H2J4 239 aa13.92□□□□□ -0.18
CDKL1-201ENST00000216378 CACNA1SQ13698 1873 aa13.91□□□□□ -0.18
CDKL1-201ENST00000216378 ALDH1L1O75891 902 aa13.91□□□□□ -0.18
CDKL1-201ENST00000216378 BCS1LQ9Y276 419 aa13.91□□□□□ -0.18
CDKL1-201ENST00000216378 LRRFIP2Q9Y608 721 aaKnown RBP13.91□□□□□ -0.18
CDKL1-201ENST00000216378 IBTKQ9P2D0 1353 aaPredicted RBP13.91□□□□□ -0.18
CDKL1-201ENST00000216378 H0YIN7 160 aa13.91□□□□□ -0.18
CDKL1-201ENST00000216378 LMBR1LQ6UX01 489 aa13.91□□□□□ -0.18
CDKL1-201ENST00000216378 NLRP3Q96P20 1036 aa13.91□□□□□ -0.18
CDKL1-201ENST00000216378 BRCA1P38398 1863 aaKnown RBP13.9□□□□□ -0.18
CDKL1-201ENST00000216378 MFAP1P55081 439 aaKnown RBP13.9□□□□□ -0.18
CDKL1-201ENST00000216378 CTSWP56202 376 aa13.9□□□□□ -0.18
CDKL1-201ENST00000216378 TSHZ3Q63HK5 1081 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms