RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 TMX1Q9H3N1 280 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 ZNF521Q96K83 1311 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 PPFIA3O75145 1194 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 ERLIN1O75477 346 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 DHX8Q14562 1220 aaKnown RBP13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 LUZP1Q86V48 1076 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 TRMT2AQ8IZ69 625 aaKnown RBP13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 NSD2O96028 1365 aa13.47□□□□□ -0.25
DNMT3B-201ENST00000201963 BIN1O00499 593 aa13.46□□□□□ -0.25
DNMT3B-201ENST00000201963 GADD45BO75293 160 aaPredicted RBP13.46□□□□□ -0.25
DNMT3B-201ENST00000201963 RBM6P78332 1123 aaKnown RBP13.46□□□□□ -0.25
DNMT3B-201ENST00000201963 ANAPC15P60006 121 aa13.46□□□□□ -0.25
DNMT3B-201ENST00000201963 TMC6Q7Z403 805 aa13.46□□□□□ -0.25
DNMT3B-201ENST00000201963 LGR6Q9HBX8 967 aa13.46□□□□□ -0.25
DNMT3B-201ENST00000201963 OGFRQ9NZT2 677 aa13.46□□□□□ -0.25
DNMT3B-201ENST00000201963 ZFYVE9O95405 1425 aa13.46□□□□□ -0.26
DNMT3B-201ENST00000201963 TYRO3Q06418 890 aa13.46□□□□□ -0.26
DNMT3B-201ENST00000201963 TSPYL1Q9H0U9 437 aa13.46□□□□□ -0.26
DNMT3B-201ENST00000201963 BOLA2Q9H3K6 86 aa13.46□□□□□ -0.26
DNMT3B-201ENST00000201963 USP6P35125 1406 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 JARID2Q92833 1246 aaPredicted RBP13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 MSL1Q68DK7 614 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 PREX1Q8TCU6 1659 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 PLCD3Q8N3E9 789 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 INTS4Q96HW7 963 aaKnown RBP13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 GJD4Q96KN9 370 aaPredicted RBP13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 DEF6Q9H4E7 631 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 SYNMO15061 1565 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 PCDH11XQ9BZA7 1347 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 PCDH11YQ9BZA8 1340 aa13.45□□□□□ -0.26
DNMT3B-201ENST00000201963 CBFA2T2O43439 604 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 KRT24Q2M2I5 525 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 SMTNL1A8MU46 457 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 SYT1P21579 422 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 PPFIBP1Q86W92 1011 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 FSIP1Q8NA03 581 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 GPT2Q8TD30 523 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 CDCA7Q9BWT1 371 aaPredicted RBP13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 SBNO1A3KN83 1393 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 PTPRCP08575 1304 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 DHX16O60231 1041 aaKnown RBP13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 KRT32Q14532 448 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 ATP5J2-PTCD1G3V325 749 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 LMAN1P49257 510 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 FLIIQ13045 1269 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 FILIP1LQ4L180 1135 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 ZSWIM4Q9H7M6 989 aa13.44□□□□□ -0.26
DNMT3B-201ENST00000201963 CCDC171Q6TFL3 1326 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 SPATA31D1Q6ZQQ2 1576 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 FAM193AP78312 1265 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 AKAP4Q5JQC9 854 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 NAP1L1P55209 391 aaKnown RBP13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 GSDMDP57764 484 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 ZBTB9Q96C00 473 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 VGLL3A8MV65 326 aa13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 SLU7O95391 586 aaKnown RBP13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 CCDC8Q9H0W5 538 aaPredicted RBP13.43□□□□□ -0.26
DNMT3B-201ENST00000201963 AK2P54819 239 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 STX1AQ16623 288 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 ZNF397Q8NF99 534 aaPredicted RBP13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 ZNF622Q969S3 477 aaKnown RBP eCLIP13.42□□□□□ -0.265e-7■□□□□ 9.2
DNMT3B-201ENST00000201963 DCAF5Q96JK2 942 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 CTAGE5O15320 804 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 ISM2Q6H9L7 571 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 WDR17Q8IZU2 1322 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 CPA1P15085 419 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 SMARCE1Q969G3 411 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 DNAI1Q9UI46 699 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 ERBB3P21860 1342 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 ZSCAN12O43309 604 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 TOP1P11387 765 aaKnown RBP13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 RDXP35241 583 aaKnown RBP13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 PPP1R42Q7Z4L9 355 aa13.42□□□□□ -0.26
DNMT3B-201ENST00000201963 ARHGAP29Q52LW3 1261 aa13.41□□□□□ -0.26
DNMT3B-201ENST00000201963 GTF3C6Q969F1 213 aa13.41□□□□□ -0.26
DNMT3B-201ENST00000201963 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
DNMT3B-201ENST00000201963 FAM173BQ6P4H8 233 aa13.41□□□□□ -0.26
DNMT3B-201ENST00000201963 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
DNMT3B-201ENST00000201963 CCAR1Q8IX12 1150 aaKnown RBP13.41□□□□□ -0.26
DNMT3B-201ENST00000201963 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
DNMT3B-201ENST00000201963 PSDA5PKW4 1024 aaPredicted RBP13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 CCT2P78371 535 aaKnown RBP13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 JAKMIP3Q5VZ66 844 aa13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 NPC1L1Q9UHC9 1359 aa13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 CAVIN2O95810 425 aa13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 CHMLP26374 656 aa13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 GSPT1P15170 499 aaKnown RBP13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 IL13P35225 146 aa13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 KIF4BQ2VIQ3 1234 aa13.4□□□□□ -0.26
DNMT3B-201ENST00000201963 ECHDC1Q9NTX5 307 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms