RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 RPAP1Q9BWH6 1393 aaPredicted RBP21.71■■□□□ 1.07
SLC22A4-201ENST00000200652 WDR33Q9C0J8 1336 aaKnown RBP21.7■■□□□ 1.06
SLC22A4-201ENST00000200652 ZNF330Q9Y3S2 320 aaPredicted RBP21.7■■□□□ 1.06
SLC22A4-201ENST00000200652 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.7■■□□□ 1.06
SLC22A4-201ENST00000200652 RFX7Q2KHR2 1363 aa21.7■■□□□ 1.06
SLC22A4-201ENST00000200652 TAF5LO75529 589 aa21.7■■□□□ 1.06
SLC22A4-201ENST00000200652 ZNF594Q96JF6 807 aaPredicted RBP21.7■■□□□ 1.06
SLC22A4-201ENST00000200652 EYA2O00167 538 aa21.69■■□□□ 1.06
SLC22A4-201ENST00000200652 LRRC24Q50LG9 513 aa21.69■■□□□ 1.06
SLC22A4-201ENST00000200652 RNF20Q5VTR2 975 aa21.69■■□□□ 1.06
SLC22A4-201ENST00000200652 ZSCAN31Q96LW9 406 aaPredicted RBP21.69■■□□□ 1.06
SLC22A4-201ENST00000200652 PSMA5P28066 241 aa21.68■■□□□ 1.06
SLC22A4-201ENST00000200652 TRIM28Q13263 835 aaKnown RBP21.68■■□□□ 1.06
SLC22A4-201ENST00000200652 NEUROD6Q96NK8 337 aa21.68■■□□□ 1.06
SLC22A4-201ENST00000200652 ZNF445P59923 1031 aa21.68■■□□□ 1.06
SLC22A4-201ENST00000200652 TIMM10P62072 90 aa21.68■■□□□ 1.06
SLC22A4-201ENST00000200652 STARD3NLO95772 234 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 ZSCAN23Q3MJ62 389 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 KIF6Q6ZMV9 814 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 SH2B1Q9NRF2 756 aaPredicted RBP21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 SMC3Q9UQE7 1217 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 CCDC9Q9Y3X0 531 aaKnown RBP21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 ZNF609O15014 1411 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 CIAO1O76071 339 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 CHGBP05060 677 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 COL9A3Q14050 684 aaPredicted RBP21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 USPL1Q5W0Q7 1092 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 DDX46Q7L014 1031 aaKnown RBP21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 TAF6LQ9Y6J9 622 aa21.67■■□□□ 1.06
SLC22A4-201ENST00000200652 ROBO1Q9Y6N7 1651 aa21.66■■□□□ 1.06
SLC22A4-201ENST00000200652 TSGA10IPQ3SY00 556 aa21.66■■□□□ 1.06
SLC22A4-201ENST00000200652 CCDC83Q8IWF9 413 aa21.66■■□□□ 1.06
SLC22A4-201ENST00000200652 HMG20BQ9P0W2 317 aa21.66■■□□□ 1.06
SLC22A4-201ENST00000200652 KBTBD3Q8NAB2 608 aa21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 PUS3Q9BZE2 481 aaKnown RBP21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 NSFL1CQ9UNZ2 370 aaKnown RBP21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 BCL9O00512 1426 aa21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 ME3Q16798 604 aa21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 RBM27Q9P2N5 1060 aaKnown RBP21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 COL16A1Q07092 1604 aaPredicted RBP21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.65■■□□□ 1.06
SLC22A4-201ENST00000200652 PCCAP05165 728 aaPredicted RBP21.64■■□□□ 1.06
SLC22A4-201ENST00000200652 SYT1P21579 422 aa21.64■■□□□ 1.06
SLC22A4-201ENST00000200652 ST3GAL1Q11201 340 aa21.64■■□□□ 1.06
SLC22A4-201ENST00000200652 MCMDC2Q4G0Z9 681 aa21.64■■□□□ 1.06
SLC22A4-201ENST00000200652 BLOC1S2Q6QNY1 142 aa21.64■■□□□ 1.06
SLC22A4-201ENST00000200652 SEC62Q99442 399 aaKnown RBP21.64■■□□□ 1.06
SLC22A4-201ENST00000200652 PLCH1Q4KWH8 1693 aa21.64■■□□□ 1.05
SLC22A4-201ENST00000200652 STX6O43752 255 aa21.64■■□□□ 1.05
SLC22A4-201ENST00000200652 ZSCAN22P10073 491 aaPredicted RBP21.64■■□□□ 1.05
SLC22A4-201ENST00000200652 SLC4A9Q96Q91 983 aa21.64■■□□□ 1.05
SLC22A4-201ENST00000200652 TPCN1Q9ULQ1 816 aa21.64■■□□□ 1.05
SLC22A4-201ENST00000200652 LRP6O75581 1613 aa21.64■■□□□ 1.05
SLC22A4-201ENST00000200652 COL22A1Q8NFW1 1626 aaPredicted RBP21.64■■□□□ 1.05
SLC22A4-201ENST00000200652 MBD3O95983 291 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 RPS6KB1P23443 525 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 CCDC57Q2TAC2 916 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 FOXD4L6Q3SYB3 417 aaPredicted RBP21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 FOXD4L3Q6VB84 417 aaPredicted RBP21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 CCDC129Q6ZRS4 1044 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 FAM43AQ8N2R8 423 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 FAM89AQ96GI7 184 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 ALDH8A1Q9H2A2 487 aaPredicted RBP21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 PAG1Q9NWQ8 432 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 MAP3K15Q6ZN16 1313 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 PALLDQ8WX93 1383 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 TCHHQ07283 1943 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 A0A1B0GUL7 405 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 EXOC5O00471 708 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 GJB2P29033 226 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 GIGYF2Q6Y7W6 1299 aaKnown RBP21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 PLA2G12BQ9BX93 195 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 TMEM63CQ9P1W3 806 aa21.63■■□□□ 1.05
SLC22A4-201ENST00000200652 GOLIM4O00461 696 aa21.62■■□□□ 1.05
SLC22A4-201ENST00000200652 ZBTB38Q8NAP3 1195 aaPredicted RBP21.62■■□□□ 1.05
SLC22A4-201ENST00000200652 KAT6BQ8WYB5 2073 aa21.62■■□□□ 1.05
SLC22A4-201ENST00000200652 AHDC1Q5TGY3 1603 aaPredicted RBP21.62■■□□□ 1.05
SLC22A4-201ENST00000200652 SH3TC1Q8TE82 1336 aa21.62■■□□□ 1.05
SLC22A4-201ENST00000200652 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
SLC22A4-201ENST00000200652 HLFQ16534 295 aa21.61■■□□□ 1.05
SLC22A4-201ENST00000200652 NECAB1Q8N987 351 aa21.61■■□□□ 1.05
SLC22A4-201ENST00000200652 CEP126Q9P2H0 1117 aa21.61■■□□□ 1.05
SLC22A4-201ENST00000200652 CSF1RP07333 972 aa21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 ANKRD1Q15327 319 aa21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 TCEANC2Q96MN5 208 aa21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 FBXO3Q9UK99 471 aa21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 U3KPZ7 1027 aaPredicted RBP21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 WNK3Q9BYP7 1800 aa21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 KRT32Q14532 448 aa21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 GDPD2Q9HCC8 539 aa21.6■■□□□ 1.05
SLC22A4-201ENST00000200652 IFIT1P09914 478 aaKnown RBP21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 TOB2Q14106 344 aaPredicted RBP21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 USP48Q86UV5 1035 aa21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 TICAM2Q86XR7 235 aa21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 DTNBO60941 627 aa21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 F13A1P00488 732 aa21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 CCDC85AQ96PX6 553 aaPredicted RBP21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 HELLSQ9NRZ9 838 aa21.59■■□□□ 1.05
SLC22A4-201ENST00000200652 NLRP10Q86W26 655 aa21.58■■□□□ 1.05
SLC22A4-201ENST00000200652 SYNE4Q8N205 404 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms