RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 UTYO14607 1347 aa12.69□□□□□ -0.38
CD9-201ENST00000009180 PDE6BP35913 854 aa12.69□□□□□ -0.38
CD9-201ENST00000009180 KCNA3P22001 575 aa12.68□□□□□ -0.38
CD9-201ENST00000009180 CTSWP56202 376 aa12.68□□□□□ -0.38
CD9-201ENST00000009180 FOXO4P98177 505 aa12.68□□□□□ -0.38
CD9-201ENST00000009180 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
CD9-201ENST00000009180 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
CD9-201ENST00000009180 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
CD9-201ENST00000009180 H0YIN7 160 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 PDE8AO60658 829 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 UBTFL1P0CB47 393 aaPredicted RBP12.67□□□□□ -0.38
CD9-201ENST00000009180 SRGNP10124 158 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 MS4A1P11836 297 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
CD9-201ENST00000009180 PDE3AQ14432 1141 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 MVPQ14764 893 aaKnown RBP12.67□□□□□ -0.38
CD9-201ENST00000009180 CRY2Q49AN0 593 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 NLRP3Q96P20 1036 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 BICC1Q9H694 974 aaKnown RBP12.67□□□□□ -0.38
CD9-201ENST00000009180 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
CD9-201ENST00000009180 LRRFIP2Q9Y608 721 aaKnown RBP12.67□□□□□ -0.38
CD9-201ENST00000009180 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
CD9-201ENST00000009180 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 CENPBP07199 599 aaPredicted RBP12.66□□□□□ -0.38
CD9-201ENST00000009180 TGFB2P61812 414 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 FAM161AQ3B820 660 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 ANKRD44Q8N8A2 993 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 TTLL11Q8NHH1 800 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 RPGRQ92834 1020 aaKnown RBP12.66□□□□□ -0.38
CD9-201ENST00000009180 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.38
CD9-201ENST00000009180 CRBNQ96SW2 442 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 PLA2G12BQ9BX93 195 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 GREM2Q9H772 168 aa12.66□□□□□ -0.38
CD9-201ENST00000009180 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
CD9-201ENST00000009180 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
CD9-201ENST00000009180 LMBR1LQ6UX01 489 aa12.65□□□□□ -0.38
CD9-201ENST00000009180 MASTLQ96GX5 879 aa12.65□□□□□ -0.38
CD9-201ENST00000009180 SEC31BQ9NQW1 1179 aa12.65□□□□□ -0.38
CD9-201ENST00000009180 CHMP3Q9Y3E7 222 aa12.65□□□□□ -0.38
CD9-201ENST00000009180 GNAI3P08754 354 aa12.64□□□□□ -0.39
CD9-201ENST00000009180 HSP90B1P14625 803 aaKnown RBP12.64□□□□□ -0.39
CD9-201ENST00000009180 NPR1P16066 1061 aa12.64□□□□□ -0.39
CD9-201ENST00000009180 STYK1Q6J9G0 422 aa12.64□□□□□ -0.39
CD9-201ENST00000009180 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
CD9-201ENST00000009180 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
CD9-201ENST00000009180 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
CD9-201ENST00000009180 CSF1RP07333 972 aa12.63□□□□□ -0.39
CD9-201ENST00000009180 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
CD9-201ENST00000009180 CCDC152Q4G0S7 254 aa12.63□□□□□ -0.39
CD9-201ENST00000009180 PRPF40BQ6NWY9 871 aaKnown RBP12.63□□□□□ -0.39
CD9-201ENST00000009180 OLFM4Q6UX06 510 aa12.63□□□□□ -0.39
CD9-201ENST00000009180 DDX46Q7L014 1031 aaKnown RBP12.63□□□□□ -0.39
CD9-201ENST00000009180 CELF1Q92879 486 aaKnown RBP12.63□□□□□ -0.39
CD9-201ENST00000009180 RBM17Q96I25 401 aaKnown RBP12.63□□□□□ -0.39
CD9-201ENST00000009180 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
CD9-201ENST00000009180 PDZRN3Q9UPQ7 1066 aa12.63□□□□□ -0.39
CD9-201ENST00000009180 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
CD9-201ENST00000009180 CACNA1SQ13698 1873 aa12.63□□□□□ -0.39
CD9-201ENST00000009180 MYH3P11055 1940 aa12.62□□□□□ -0.39
CD9-201ENST00000009180 TAF1P21675 1872 aa12.62□□□□□ -0.39
CD9-201ENST00000009180 GNAI2P04899 355 aa12.62□□□□□ -0.39
CD9-201ENST00000009180 ITGA6P23229 1130 aa12.62□□□□□ -0.39
CD9-201ENST00000009180 RABL6Q3YEC7 729 aaPredicted RBP12.62□□□□□ -0.39
CD9-201ENST00000009180 TTLL6Q8N841 843 aa12.62□□□□□ -0.39
CD9-201ENST00000009180 ZNF594Q96JF6 807 aaPredicted RBP12.62□□□□□ -0.39
CD9-201ENST00000009180 CRAMP1Q96RY5 1269 aa12.62□□□□□ -0.39
CD9-201ENST00000009180 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
CD9-201ENST00000009180 RTL9Q8NET4 1388 aa12.61□□□□□ -0.39
CD9-201ENST00000009180 SLX4Q8IY92 1834 aa12.61□□□□□ -0.39
CD9-201ENST00000009180 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
CD9-201ENST00000009180 YBX3P16989 372 aaKnown RBP eCLIP12.61□□□□□ -0.39
CD9-201ENST00000009180 GRAPQ13588 217 aa12.61□□□□□ -0.39
CD9-201ENST00000009180 DALRD3Q5D0E6 543 aaKnown RBP12.61□□□□□ -0.39
CD9-201ENST00000009180 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
CD9-201ENST00000009180 EXOC6Q8TAG9 804 aa12.61□□□□□ -0.39
CD9-201ENST00000009180 GRAPLQ8TC17 118 aaPredicted RBP12.61□□□□□ -0.39
CD9-201ENST00000009180 CNKSR1Q969H4 720 aa12.61□□□□□ -0.39
CD9-201ENST00000009180 ZBTB40Q9NUA8 1239 aa12.61□□□□□ -0.39
CD9-201ENST00000009180 C21orf2O43822 256 aa12.6□□□□□ -0.39
CD9-201ENST00000009180 KLHDC4Q8TBB5 520 aa12.6□□□□□ -0.39
CD9-201ENST00000009180 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
CD9-201ENST00000009180 PNMA6EA0A0J9YXQ4 647 aa12.59□□□□□ -0.39
CD9-201ENST00000009180 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
CD9-201ENST00000009180 ALDH1B1P30837 517 aa12.59□□□□□ -0.39
CD9-201ENST00000009180 IFIT5Q13325 482 aaKnown RBP12.59□□□□□ -0.39
CD9-201ENST00000009180 CEP85Q6P2H3 762 aa12.59□□□□□ -0.39
CD9-201ENST00000009180 ANKRD18AQ8IVF6 992 aa12.59□□□□□ -0.39
CD9-201ENST00000009180 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
CD9-201ENST00000009180 SRGAP3O43295 1099 aa12.58□□□□□ -0.4
CD9-201ENST00000009180 RFX5P48382 616 aaPredicted RBP12.58□□□□□ -0.4
CD9-201ENST00000009180 RPS8P62241 208 aaKnown RBP12.58□□□□□ -0.4
CD9-201ENST00000009180 CCDC57Q2TAC2 916 aa12.58□□□□□ -0.4
CD9-201ENST00000009180 TAF7LQ5H9L4 462 aa12.58□□□□□ -0.4
CD9-201ENST00000009180 CDC5LQ99459 802 aaKnown RBP12.58□□□□□ -0.4
CD9-201ENST00000009180 PA2G4Q9UQ80 394 aaKnown RBP12.58□□□□□ -0.4
CD9-201ENST00000009180 MTX1Q13505 466 aa12.57□□□□□ -0.4
CD9-201ENST00000009180 GPR162Q16538 588 aa12.57□□□□□ -0.4
CD9-201ENST00000009180 C7orf43Q8WVR3 580 aa12.57□□□□□ -0.4
CD9-201ENST00000009180 PUS3Q9BZE2 481 aaKnown RBP12.57□□□□□ -0.4
CD9-201ENST00000009180 SIL1Q9H173 461 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms