RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Adamtsl3G3UXC7 1706 aa16.01■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Mst1rQ62190 1378 aa16.01■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Kansl3A2RSY1 903 aaKnown RBP16.01■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Dnajc5gQ8C632 165 aa16.01■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Gimap6Q8K349 305 aa16.01■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Tlcd1Q99JT6 247 aa16.01■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Zfp317Q8C0Q5 607 aa16■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Dnajc10Q9DC23 793 aa16■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Tsen34Q8BMZ5 316 aa16■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Ppm1mQ8BU27 406 aa16■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Nlrp3Q8R4B8 1033 aa16■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Kcnh5Q920E3 988 aa16■□□□□ 0.15
Clcn4-203ENSMUST00000210061 U2af2P26369 475 aaKnown RBP15.99■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Tbc1d4Q8BYJ6 1307 aa15.99■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Nek11Q8C0Q4 628 aa15.99■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Syt10Q9R0N4 523 aa15.99■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Fbxl16A2RT62 479 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 TrdnE9Q9K5 693 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Usp28Q5I043 1051 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Nlrp9bQ66X22 1003 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Irgm2A0A140LIF8 407 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Rbbp8nlA2ABX0 614 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Ccdc155Q80VJ8 648 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Dnaaf2Q8BPI1 814 aa15.98■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Ythdc1E9Q5K9 736 aaKnown RBP15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Tmem109Q3UBX0 243 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 DbnlQ62418 436 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Mtmr3Q8K296 1196 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Card6E9PWH2 1175 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Nfatc2ipO09130 412 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Clec11aO88200 328 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Ubxn4Q8VCH8 506 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Pdia6Q922R8 440 aaKnown RBP15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 TimelessQ9R1X4 1197 aa15.97■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Zscan29E9Q5B4 869 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Lmod3E9QA62 571 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Ms4a1P19437 291 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Igfbp6P47880 238 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Limch1Q3UH68 1057 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 C3P01027 1663 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Neurod6P48986 337 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Jarid2Q62315 1234 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Hook1Q8BIL5 728 aa15.96■□□□□ 0.15
Clcn4-203ENSMUST00000210061 Tmem2Q5FWI3 1383 aa15.95■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Adora1Q60612 326 aa15.95■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Smarcc2Q6PDG5 1213 aa15.95■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Lrrfip2Q91WK0 415 aa15.95■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Lmtk3Q5XJV6 1424 aa15.95■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Lrrc8aQ80WG5 810 aa15.95■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Cdca8Q8BHX3 289 aa15.95■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ccdc112A0AUP1 442 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Stx1aO35526 288 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ano10Q8BH79 659 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Tmem87bQ8BKU8 555 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Usp44Q8C2S0 711 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Pcdhb15Q91Y04 786 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 GpkowQ56A08 488 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ifit1Q64282 463 aa15.94■□□□□ 0.14
Clcn4-203ENSMUST00000210061 InsrrQ9WTL4 1300 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Rrp1P56183 494 aaKnown RBP15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ube2oQ6ZPJ3 1288 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Zfp397Q7TNK4 527 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Mrpl44Q9CY73 333 aaKnown RBP15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ttll7A4Q9F0 912 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Taf3Q5HZG4 932 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Vps54Q5SPW0 977 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 TfrcQ62351 763 aaKnown RBP15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Zpr1Q62384 459 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Cep135Q6P5D4 1140 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Arid5bQ8BM75 1188 aaKnown RBP15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ccdc158Q8CDI6 1109 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Dnaaf4Q8R368 420 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Pdzd9Q9D9M4 266 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ddx60E9PZQ1 1711 aa15.93■□□□□ 0.14
Clcn4-203ENSMUST00000210061 FosbP13346 338 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Iqsec3Q3TES0 1195 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Mb21d2Q8C525 428 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Kcnk13Q8R1P5 405 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Gm10471E9Q1C7 252 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ap5z1Q3U829 807 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ddx46Q569Z5 1032 aaKnown RBP15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Morc2aQ69ZX6 1030 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Slu7Q8BHJ9 585 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 CrebrfQ8CDG5 640 aaKnown RBP15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Rassf8Q8CJ96 419 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Otud6bQ8K2H2 294 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Snw1Q9CSN1 536 aaKnown RBP15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Cnpy2Q9QXT0 182 aa15.92■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Simc1E9Q6E9 1354 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Shank2Q80Z38 1476 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Prl7a2O54831 253 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Zkscan4Q5SZT6 480 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Gli3Q61602 1583 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 TrhQ62361 256 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ric1Q69ZJ7 1422 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ptcd1Q8C2E4 695 aaKnown RBP15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Q8C5K5 320 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Sh3bp5Q9Z131 463 aa15.91■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Hspa2P17156 633 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Dhx38Q80X98 1228 aa15.9■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 10.4 ms