RNA–Protein interactions for RNA: ENSMUST00000209364.1

Prpf40a-206, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 2,833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-206ENSMUST00000209364 Ltb4r2Q9JJL9 360 aa15.15■□□□□ 0.02
Prpf40a-206ENSMUST00000209364 AbraQ8BUZ1 375 aa15.15■□□□□ 0.02
Prpf40a-206ENSMUST00000209364 Pm20d1Q8C165 503 aa15.15■□□□□ 0.02
Prpf40a-206ENSMUST00000209364 Brf1Q8CFK2 676 aa15.15■□□□□ 0.02
Prpf40a-206ENSMUST00000209364 Gripap1Q8VD04 806 aa15.15■□□□□ 0.02
Prpf40a-206ENSMUST00000209364 Cacna1sQ02789 1880 aa15.15■□□□□ 0.02
Prpf40a-206ENSMUST00000209364 Ccdc173A0JLY1 547 aa15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Myd88P22366 296 aa15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Nxf2Q4ZGD8 691 aa15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Dcaf5Q80T85 946 aa15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Mrps27Q8BK72 415 aaKnown RBP15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Stk3Q9JI10 497 aa15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Gigyf1Q99MR1 1044 aaKnown RBP15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Arap2Q8BZ05 1703 aa15.14■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Jarid2Q62315 1234 aa15.13■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Zkscan16A2ALW2 728 aa15.13■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Hvcn1Q3U2S8 269 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Jmjd4Q8BFT6 427 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Zkscan1Q8BGS3 561 aaKnown RBP15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Slc26a8Q8R0C3 999 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Bag3Q9JLV1 577 aaKnown RBP15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 MccE9PWI3 1003 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Gnl3lQ6PGG6 577 aaKnown RBP15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Gpatch11Q3UFS4 262 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Pde3bQ61409 1100 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Ankib1Q6ZPS6 1085 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Q8C5K5 320 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Psrc1Q9D0P7 329 aa15.12■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 AtrnQ9WU60 1428 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Casz1Q9CWL2 1761 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Hspa1lP16627 641 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Kif4P33174 1231 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Pde4dQ01063 747 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 EspnlQ3UYR4 1005 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 MetP16056 1379 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Ddb1Q3U1J4 1140 aaKnown RBP15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 4930504O13RikQ8C5Z9 145 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Nip7Q9CXK8 180 aaKnown RBP15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Fam213aQ9CYH2 218 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Pmfbp1Q9WVQ0 1022 aa15.11■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Stk11ipQ3TAA7 1072 aa15.1■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Brd2Q7JJ13 798 aaKnown RBP15.1■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Olfml1Q8BSH2 233 aa15.1■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Adam1bQ8R534 806 aa15.1■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Zbtb45Q52KG4 520 aa15.1■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Dhx38Q80X98 1228 aa15.1■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Cyp27a1Q9DBG1 533 aa15.1■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Prl3d3A0A0M6L0J6 224 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Vps33bP59016 617 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Anapc15P60007 132 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 CtifQ6PEE2 600 aaKnown RBP15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 NexnQ7TPW1 607 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Smc4Q8CG47 1286 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Slc5a4bQ91ZP4 660 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Tbc1d4Q8BYJ6 1307 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 AppP12023 770 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Ggt6Q6PDE7 497 aa15.09■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Abca3Q8R420 1704 aa15.08■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Ppp4r3aQ6P2K6 820 aa15.08■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Dis3l2Q8CI75 870 aaKnown RBP15.08■□□□□ 0.01
Prpf40a-206ENSMUST00000209364 Prl3d2F6R3P9 224 aa15.08■□□□□ 0
Prpf40a-206ENSMUST00000209364 Sult6b1P0CC03 303 aa15.08■□□□□ 0
Prpf40a-206ENSMUST00000209364 Irx2P81066 474 aa15.08■□□□□ 0
Prpf40a-206ENSMUST00000209364 Tshz3Q8CGV9 1081 aa15.08■□□□□ 0
Prpf40a-206ENSMUST00000209364 AatfQ9JKX4 526 aaKnown RBP15.08■□□□□ 0
Prpf40a-206ENSMUST00000209364 Rad50P70388 1312 aa15.08■□□□□ 0
Prpf40a-206ENSMUST00000209364 Prr29B1ARI9 187 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Ppfia1B2RXQ2 1266 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Neurod6P48986 337 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Nlrp1aQ2LKU9 1182 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 4930548H24RikQ9D496 437 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 LlphQ9D945 130 aaKnown RBP15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 LratQ9JI60 231 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Ms4a2P20490 235 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Dnajc2P54103 621 aaKnown RBP15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 DbnlQ62418 436 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Jakmip1Q8BVL9 626 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Ddx41Q91VN6 622 aaKnown RBP15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Ric1Q69ZJ7 1422 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Cdkn1cP49919 348 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Adam1aQ60813 791 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 RbsnQ80Y56 783 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Ttc19Q8CC21 365 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Zbtb1Q91VL9 713 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Il1rapl2Q9ERS6 686 aa15.07■□□□□ 0
Prpf40a-206ENSMUST00000209364 Ssc5dQ8BV57 1371 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Gm973E9Q295 1059 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Rhot2Q8JZN7 620 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 AnlnQ8K298 1121 aaKnown RBP15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 SrrtQ99MR6 875 aaKnown RBP15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Mlh1Q9JK91 760 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Ankrd31A0A140LI88 1765 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Sf3b2Q3UJB0 878 aaKnown RBP15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Tshz1Q5DTH5 1084 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Mctp2Q5RJH2 878 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Atg9aQ68FE2 551 aa15.06■□□□□ 0
Prpf40a-206ENSMUST00000209364 Greb1lB9EJV3 1913 aa15.05■□□□□ 0
Prpf40a-206ENSMUST00000209364 Top1mtQ8R4U6 593 aa15.05■□□□□ 0
Prpf40a-206ENSMUST00000209364 Col22a1E9Q7P1 1613 aa15.05■□□□□ -0
Prpf40a-206ENSMUST00000209364 Nlrp3Q8R4B8 1033 aa15.05■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms