RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Dennd4bQ3U1Y4 1499 aa20.57■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Sun3Q5SS91 320 aa20.57■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Pdia3P27773 505 aaKnown RBP20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Psmd1Q3TXS7 953 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Tbc1d32Q3URV1 1296 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Znf771Q8BJ90 317 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Armc3A2AU72 881 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Pla2g4fQ50L41 855 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Prkab2Q6PAM0 271 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 GnaqP21279 359 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Kiaa1211Q5PR69 1207 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ccdc93Q7TQK5 629 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Tmx4Q8C0L0 335 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Vamp4O70480 141 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Chmp6P0C0A3 200 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 LifrP42703 1092 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ttll12Q3UDE2 639 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Msl1Q6PDM1 616 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Irs4Q9Z0Y7 1216 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Astn2Q80Z10 1352 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Znf518aB2RRF6 1478 aaKnown RBP20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Snx25Q3ZT31 840 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Pknox2Q8BG99 474 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ccdc122Q8BVN0 290 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Slc39a6Q8C145 765 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Mmel1Q9JLI3 765 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Eme2Q56A04 373 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Smarcc2Q6PDG5 1213 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Hspa4Q61316 841 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 PxdnQ3UQ28 1475 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Map2k1P31938 393 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 AdnpQ9Z103 1108 aaKnown RBP20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 3425401B19RikD3Z1D3 1412 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 ParnQ8VDG3 624 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Haus2Q9CQS9 234 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Gle1Q8R322 699 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Hoxc9P09633 260 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Txnrd1Q9JMH6 613 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 HellsQ60848 821 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 WizO88286 1684 aaKnown RBP20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Mdm2P23804 489 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Dact3Q0PHV7 610 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 TrhQ62361 256 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Uchl5Q9WUP7 329 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Akr1c19G3X9Y6 323 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ankrd40Q5SUE8 363 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Znf394Q9Z1D9 521 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ssh2Q5SW75 1423 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ccdc112A0AUP1 442 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Neurog2P70447 263 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Cyp4f39Q8BGU0 532 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Calm1P0DP26 149 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Calm2P0DP27 149 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Calm3P0DP28 149 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Gm18336A0A140LIU8 765 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Epb41l2O70318 988 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ier5O89113 308 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Rab3gap1Q80UJ7 981 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 CenppQ9CZ92 286 aa20.52■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Mrps25Q9D125 171 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 CrklP47941 303 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Usp25P57080 1055 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Ginm1Q91WR6 327 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Cavin2Q63918 418 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Sbno1Q689Z5 1390 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Asic1Q6NXK8 526 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Ppp1r10Q80W00 888 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Atp8b3Q6UQ17 1335 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Snw1Q9CSN1 536 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Krt15Q61414 452 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Clip2Q9Z0H8 1047 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Sh3tc1G3X9F6 1346 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Cops6O88545 324 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 MarcksP26645 309 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Snrpa1P57784 255 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Lrrc43Q3V0L5 667 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Exoc8Q6PGF7 716 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 SympkQ80X82 1284 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Brd1E9PZ26 1189 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Naa15Q80UM3 865 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Akap2O54931 893 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Gnat2P50149 354 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Miga2Q8BK03 593 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Cadps2Q8BYR5 1297 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Palm3A2TJV2 734 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Gng11P61953 73 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 P4ha1Q60715 534 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Nek11Q8C0Q4 628 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Rtn1Q8K0T0 780 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Wdr7Q920I9 1489 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Prrc2bQ7TPM1 1486 aaKnown RBP20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Mrps27Q8BK72 415 aaKnown RBP20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Esco1Q69Z69 843 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Trim55G3X8Y1 545 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 CpvlQ9D3S9 478 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Nlrp2Q4PLS0 1046 aaKnown RBP20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 MycbpapQ5SUV2 932 aa20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Ccdc12Q8R344 166 aaKnown RBP20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Exoc1Q8R3S6 894 aa20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Naa16Q9DBB4 864 aa20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms