RNA–Protein interactions for RNA: ENSMUST00000199896.1

Smarcc1-207, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,773 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-207ENSMUST00000199896 Dennd4bQ3U1Y4 1499 aa20.57■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Sun3Q5SS91 320 aa20.57■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Pdia3P27773 505 aaKnown RBP20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Psmd1Q3TXS7 953 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Tbc1d32Q3URV1 1296 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Znf771Q8BJ90 317 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Armc3A2AU72 881 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Pla2g4fQ50L41 855 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Prkab2Q6PAM0 271 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 GnaqP21279 359 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Kiaa1211Q5PR69 1207 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ccdc93Q7TQK5 629 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Tmx4Q8C0L0 335 aa20.56■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Vamp4O70480 141 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Chmp6P0C0A3 200 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 LifrP42703 1092 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ttll12Q3UDE2 639 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Msl1Q6PDM1 616 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Irs4Q9Z0Y7 1216 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Astn2Q80Z10 1352 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Znf518aB2RRF6 1478 aaKnown RBP20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Snx25Q3ZT31 840 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Pknox2Q8BG99 474 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ccdc122Q8BVN0 290 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Slc39a6Q8C145 765 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Mmel1Q9JLI3 765 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Eme2Q56A04 373 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Smarcc2Q6PDG5 1213 aa20.55■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Hspa4Q61316 841 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 PxdnQ3UQ28 1475 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Map2k1P31938 393 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 AdnpQ9Z103 1108 aaKnown RBP20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 3425401B19RikD3Z1D3 1412 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 ParnQ8VDG3 624 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Haus2Q9CQS9 234 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Gle1Q8R322 699 aa20.54■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Hoxc9P09633 260 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Txnrd1Q9JMH6 613 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 HellsQ60848 821 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 WizO88286 1684 aaKnown RBP20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Mdm2P23804 489 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Dact3Q0PHV7 610 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 TrhQ62361 256 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Uchl5Q9WUP7 329 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Akr1c19G3X9Y6 323 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ankrd40Q5SUE8 363 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Znf394Q9Z1D9 521 aa20.53■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ssh2Q5SW75 1423 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ccdc112A0AUP1 442 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Neurog2P70447 263 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Cyp4f39Q8BGU0 532 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Calm1P0DP26 149 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Calm2P0DP27 149 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Calm3P0DP28 149 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Gm18336A0A140LIU8 765 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Epb41l2O70318 988 aaKnown RBP20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Ier5O89113 308 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 Rab3gap1Q80UJ7 981 aa20.52■□□□□ 0.88
Smarcc1-207ENSMUST00000199896 CenppQ9CZ92 286 aa20.52■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Mrps25Q9D125 171 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 CrklP47941 303 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Usp25P57080 1055 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Ginm1Q91WR6 327 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Cavin2Q63918 418 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Sbno1Q689Z5 1390 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Asic1Q6NXK8 526 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Ppp1r10Q80W00 888 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Atp8b3Q6UQ17 1335 aa20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Snw1Q9CSN1 536 aaKnown RBP20.51■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Krt15Q61414 452 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Clip2Q9Z0H8 1047 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Sh3tc1G3X9F6 1346 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Cops6O88545 324 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 MarcksP26645 309 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Snrpa1P57784 255 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Lrrc43Q3V0L5 667 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Exoc8Q6PGF7 716 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 SympkQ80X82 1284 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Brd1E9PZ26 1189 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Naa15Q80UM3 865 aaKnown RBP20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Akap2O54931 893 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Gnat2P50149 354 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Miga2Q8BK03 593 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Cadps2Q8BYR5 1297 aa20.5■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Palm3A2TJV2 734 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Gng11P61953 73 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 P4ha1Q60715 534 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Nek11Q8C0Q4 628 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Rtn1Q8K0T0 780 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Wdr7Q920I9 1489 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Prrc2bQ7TPM1 1486 aaKnown RBP20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Mrps27Q8BK72 415 aaKnown RBP20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Esco1Q69Z69 843 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Trim55G3X8Y1 545 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 CpvlQ9D3S9 478 aa20.49■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Nlrp2Q4PLS0 1046 aaKnown RBP20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 MycbpapQ5SUV2 932 aa20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Ccdc12Q8R344 166 aaKnown RBP20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Exoc1Q8R3S6 894 aa20.48■□□□□ 0.87
Smarcc1-207ENSMUST00000199896 Naa16Q9DBB4 864 aa20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms