RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Atp2b3Q0VF55 1220 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ift74Q8BKE9 600 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 DlatQ8BMF4 642 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ythdc2B2RR83 1445 aaKnown RBP17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Hdhd2Q3UGR5 259 aa17.74■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 E9QMW4 1145 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Slc1a4O35874 532 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 SfpqQ8VIJ6 699 aaKnown RBP17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ccdc94Q9D6J3 314 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Eif4a2P10630 407 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Exoc5Q3TPX4 708 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Lman1Q9D0F3 517 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Gas8Q60779 478 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Pdzrn3Q69ZS0 1063 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Gle1Q8R322 699 aa17.73■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 TrdnE9Q9K5 693 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Luc7l2Q7TNC4 392 aaKnown RBP17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Tti2Q8BGV4 512 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 BbxQ8VBW5 907 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 RestQ8VIG1 1082 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Haus2Q9CQS9 234 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ctnnbl1Q9CWL8 563 aaKnown RBP17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Pet2A2AHY8 747 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Calm1P0DP26 149 aaKnown RBP17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Calm2P0DP27 149 aaKnown RBP17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Calm3P0DP28 149 aaKnown RBP17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ehbp1Q69ZW3 1231 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Mcm6P97311 821 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Slc14a2Q8R4T9 930 aa17.72■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 AU019823E9PUQ3 292 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 DesP31001 469 aaKnown RBP17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 DymQ8CHY3 669 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Tceanc2Q8R2M0 207 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Gnat2P50149 354 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ifit2Q64112 472 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Acbd3Q8BMP6 525 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Kdm4cQ8VCD7 1054 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Q9D5Q8 446 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ak2Q9WTP6 239 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Dennd3A2RT67 1274 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Speer4aF8VPX6 267 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 RalylQ8BTF8 293 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Tagap1P0CAX8 505 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Supt6hQ62383 1726 aaKnown RBP17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Fgfr1opQ66JX5 399 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 RarsQ9D0I9 660 aaKnown RBP17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 AmfrQ9R049 643 aa17.71■□□□□ 0.43
Pcdha9-201ENSMUST00000115659 Ier5O89113 308 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Hmgb1P63158 215 aaKnown RBP17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Dzip1Q8BMD2 852 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gimap8Q75N62 688 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Prpf40aQ9R1C7 953 aaKnown RBP17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Fam213aQ9CYH2 218 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Syce1Q9D495 329 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Shroom2A2ALU4 1481 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Krt15Q61414 452 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Hsf2bpQ9D4G2 338 aa17.7■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Ift122Q6NWV3 1182 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gm28919A0A087WP35 240 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Fam186bD3Z420 943 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Egfl6Q9JJZ5 550 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Ube3aO08759 870 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Exoc1Q8R3S6 894 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Zbtb3Q91X45 518 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Yeats4Q9CR11 227 aaKnown RBP17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Uso1Q9Z1Z0 959 aaKnown RBP17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gbp8Q2V6D6 525 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Ctnna2Q61301 953 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Lrrc9Q8CDN9 1456 aa17.69■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Cyb5rlB1AS42 316 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gbp1Q01514 589 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Efcab2Q9CQ46 164 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 PtprgQ05909 1442 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Slc4a4O88343 1079 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Nip7Q9CXK8 180 aaKnown RBP17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Ranbp6Q8BIV3 1105 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 AdnpQ9Z103 1108 aaKnown RBP17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Homer1Q9Z2Y3 366 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Usp5P56399 858 aaKnown RBP17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Top1Q04750 767 aaKnown RBP17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Usp37Q8C0R0 979 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Grpel1Q99LP6 217 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 DonsonQ9QXP4 560 aa17.68■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Zc3h12cQ5DTV4 884 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Sun3Q5SS91 320 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Ssh2Q5SW75 1423 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gm45015A0A140LII9 184 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Zkscan16A2ALW2 728 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gm10378F6XQQ1 160 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Ppfia3P60469 1194 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gramd4Q8CB44 633 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 MthfsQ9D110 203 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Utp18Q5SSI6 552 aaKnown RBP17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Ankrd40Q5SUE8 363 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Spata24Q6P926 205 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Shtn1Q8K2Q9 631 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Edc4Q3UJB9 1406 aaKnown RBP17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 MycnP03966 462 aaKnown RBP17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Gadd45bP22339 160 aa17.67■□□□□ 0.42
Pcdha9-201ENSMUST00000115659 Tmem132eQ6IEE6 982 aa17.66■□□□□ 0.42
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms