RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 AU019823E9PUQ3 292 aa12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Ssrp1Q08943 708 aaKnown RBP12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Srgap1Q91Z69 1062 aa12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Arhgef11Q68FM7 1552 aa12.71□□□□□ -0.37
Scn8a-203ENSMUST00000108908 Gbp4Q61107 620 aa12.71□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Rapgef3Q8VCC8 918 aa12.71□□□□□ -0.38
Scn8a-203ENSMUST00000108908 LifrP42703 1092 aa12.71□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Znf771Q8BJ90 317 aa12.71□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Sde2Q8K1J5 448 aaKnown RBP12.71□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Sbno1Q689Z5 1390 aa12.71□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Jdp2P97875 163 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Slc4a8Q8JZR6 1089 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 CenppQ9CZ92 286 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Nap1l2P51860 460 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Emilin2Q8K482 1074 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Tmod2Q9JKK7 351 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Prkab2Q6PAM0 271 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Maats1Q8BRC6 783 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Dydc2Q9D3X8 139 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Skint5A7XUY5 1461 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Pram1Q6BCL1 675 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Myo1bP46735 1107 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Epb41l3Q9WV92 929 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ier5O89113 308 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Abtb2Q7TQI7 1024 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Mrps25Q9D125 171 aaKnown RBP12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Map3k19E9Q3S4 1311 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Atf7ipQ7TT18 1306 aa12.7□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Sun3Q5SS91 320 aa12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Tbc1d5Q80XQ2 815 aa12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Lmo7E9PYF4 1699 aaKnown RBP12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Bms1Q6PGF5 1284 aaKnown RBP12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Nop53Q8BK35 484 aaKnown RBP12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ankrd1Q9CR42 319 aa12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Mrpl12Q9DB15 201 aaKnown RBP12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Brd1E9PZ26 1189 aaKnown RBP12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cbx1P83917 185 aaKnown RBP12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cnnm2Q3TWN3 875 aa12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Mmel1Q9JLI3 765 aa12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Pdcd6ipQ9WU78 869 aaKnown RBP12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Gtf2a1Q99PM3 378 aa12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Pkd2l2Q9JLG4 621 aa12.69□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ranbp6Q8BIV3 1105 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cetn2Q9R1K9 172 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Kdm5aQ3UXZ9 1690 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Pla2g4fQ50L41 855 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 SphkapQ6NSW3 1687 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Aldh8a1Q8BH00 487 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 RestQ8VIG1 1082 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Rad50P70388 1312 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Znf692Q3U381 531 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Slc39a6Q8C145 765 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cfap53Q9D439 514 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 NcapgE9PWG6 1004 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Adgrl2Q8JZZ7 1487 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Mdm2P23804 489 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Usp25P57080 1055 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Tax1bp1Q3UKC1 814 aaKnown RBP12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Eme2Q56A04 373 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Hspa4Q61316 841 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Liat1Q810M6 228 aa12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Mrps27Q8BK72 415 aaKnown RBP12.68□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Spocd1B1ASB6 936 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Zkscan7E9PVW1 718 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 RragbQ6NTA4 374 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Tmx1Q8VBT0 278 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ak2Q9WTP6 239 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ift122Q6NWV3 1182 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Msl1Q6PDM1 616 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cyp2ab1S4R196 498 aa12.67□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cfap73J3QPZ5 306 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Snw1Q9CSN1 536 aaKnown RBP12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Znf394Q9Z1D9 521 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Jakmip3Q5DTN8 844 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ppp1r10Q80W00 888 aaKnown RBP12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Tmx4Q8C0L0 335 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 RtcbQ99LF4 505 aaKnown RBP12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Rdm1Q9CQK3 281 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cetn1P41209 172 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ptch1Q61115 1434 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ifit2Q64112 472 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cyp4f39Q8BGU0 532 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Rtn1Q8K0T0 780 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Xrcc4Q924T3 326 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Aifm3Q3TY86 605 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Vps54Q5SPW0 977 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Nsd3Q6P2L6 1439 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Rab3gap1Q80UJ7 981 aa12.66□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Calm1P0DP26 149 aaKnown RBP12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Calm2P0DP27 149 aaKnown RBP12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Calm3P0DP28 149 aaKnown RBP12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Gps2Q921N8 327 aa12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Ankrd50F7BE84 1390 aa12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Abca16E9PWJ7 1678 aa12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Cep135Q6P5D4 1140 aa12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Edc4Q3UJB9 1406 aaKnown RBP12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Fermt2Q8CIB5 680 aa12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Eif4g3Q80XI3 1579 aaKnown RBP12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Exoc8Q6PGF7 716 aa12.65□□□□□ -0.38
Scn8a-203ENSMUST00000108908 Irs4Q9Z0Y7 1216 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms