RNA–Protein interactions for RNA: ENSMUST00000071898.5

Cpsf1-201, Transcript of Cleavage and polyadenylation specificity factor subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf1, Length 4,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1-201ENSMUST00000071898 Abl1P00520 1123 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Cdkn1cP49919 348 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Clcn1Q64347 994 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Amigo3Q8C2S7 508 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 AidaQ8C4Q6 305 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 SrrtQ99MR6 875 aaKnown RBP11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 ZwintQ9CQU5 252 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 UvssaQ9D479 717 aa11.61□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Tmem87bQ8BKU8 555 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ssfa2Q922B9 1252 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Gtf2f1Q3THK3 508 aaKnown RBP11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Morc2aQ69ZX6 1030 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ccdc66Q6NS45 935 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Pik3c2bE9QAN8 1632 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Tmem131lQ3U3D7 1597 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Sde2Q8K1J5 448 aaKnown RBP11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ripk4Q9ERK0 786 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Sh3tc1G3X9F6 1346 aa11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Wdr33Q8K4P0 1330 aaKnown RBP11.6□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Rbm27Q5SFM8 1060 aaKnown RBP11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ccdc178Q8CDV0 866 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Rufy2Q8R4C2 606 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 PigbQ9JJQ0 542 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Arhgap33Q80YF9 1305 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Abcc12Q80WJ6 1366 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Dctn1O08788 1281 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ier5O89113 308 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Tm6sf1P58749 370 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Atp1b3P97370 278 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Drc7Q6V3W6 876 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Fsd2Q8BZ52 692 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Atf7Q8R0S1 413 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ppp6r3Q922D4 844 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 CltaO08585 235 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Mmp8O70138 465 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Ltv1Q6NSQ7 470 aaKnown RBP11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Dbndd1Q9CZ00 160 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Cdc45Q9Z1X9 566 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Cops6O88545 324 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Afg3l2Q8JZQ2 802 aaKnown RBP11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Kdm4cQ8VCD7 1054 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 SetQ9EQU5 289 aaKnown RBP11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Setd1aE9PYH6 1716 aa11.59□□□□□ -0.55
Cpsf1-201ENSMUST00000071898 Stox1B2RQL2 990 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Wdr78E9PYY5 807 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Pa2g4P50580 394 aaKnown RBP11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 ImmtQ8CAQ8 757 aaKnown RBP11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Gdpd2Q9ESM6 539 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Zkscan16A2ALW2 728 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Pdia4P08003 638 aaKnown RBP11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Riok1Q922Q2 567 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Ttc14Q9CSP9 761 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Smc2Q8CG48 1191 aaKnown RBP11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Trim29Q8R2Q0 587 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Atg4a-psA0A0G2JFS9 396 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Cnksr1A2A9K7 700 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Cfap69Q8BH53 942 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Atg4aQ8C9S8 396 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 ParvgQ9ERD8 331 aa11.58□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Ube2hP62257 183 aa11.57□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Foxp4Q9DBY0 795 aaKnown RBP11.57□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Zbtb1Q91VL9 713 aa11.57□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Erbb4Q61527 1308 aa11.57□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Tmem67Q8BR76 992 aa11.57□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Tceanc2Q8R2M0 207 aa11.57□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Tmem143Q8VD26 458 aa11.57□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Rbm8a2A0A0N4SUH6 174 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Speer4dL7N216 212 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Dnajc2P54103 621 aaKnown RBP11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Atp2b4Q6Q477 1205 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Tex2Q6ZPJ0 1128 aaKnown RBP11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Znf18Q810A1 556 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Kiaa0319lQ8K135 1048 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Rbm8aQ9CWZ3 174 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 C3P01027 1663 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Vars2Q3U2A8 1060 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Prpf4bQ61136 1007 aaKnown RBP11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Igbp1bQ9QZ29 343 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Mybbp1aQ7TPV4 1344 aaKnown RBP11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Slc7a3P70423 618 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Zrsr2Q62377 462 aaKnown RBP11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Golim4Q8BXA1 655 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Krt84Q99M73 603 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Cyp27a1Q9DBG1 533 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Col15a1O35206 1367 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Limch1Q3UH68 1057 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Adam1aQ60813 791 aa11.56□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Spg7Q3ULF4 781 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Erich4Q3UNU4 136 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Ipo7Q9EPL8 1038 aaKnown RBP11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Hmg20bQ9Z104 317 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Stk36Q69ZM6 1316 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Itsn1Q9Z0R4 1714 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Gadd45bP22339 160 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Pdzrn3Q69ZS0 1063 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Paf1Q8K2T8 535 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Syde2E9PUP1 1314 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 NcapgE9PWG6 1004 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 Il4rP16382 810 aa11.55□□□□□ -0.56
Cpsf1-201ENSMUST00000071898 TbcaP48428 108 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms