RNA–Protein interactions for RNA: ENSMUST00000024620.6

Chd1-201, Transcript of Chromodomain-helicase-DNA-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Chd1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1-201ENSMUST00000024620 NeblQ0II04 452 aa11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ccbe1Q3MI99 408 aa11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Eif3j1Q3UGC7 261 aaKnown RBP11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Rgl3Q3UYI5 709 aa11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Eif3j2Q66JS6 263 aa11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ube2oQ6ZPJ3 1288 aa11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Tada3Q8R0L9 432 aa11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Nfu1Q9QZ23 255 aa11.52□□□□□ -0.57
Chd1-201ENSMUST00000024620 Jakmip2D3YXK0 820 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Tnnt1O88346 262 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Dnaaf2Q8BPI1 814 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ivns1abpQ920Q8 642 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Gdpd2Q9ESM6 539 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Zcchc17Q9ESX4 241 aaKnown RBP11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Birc5O70201 140 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Rps6ka3P18654 740 aaKnown RBP11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Mnat1P51949 309 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Mcm2P97310 904 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ddx19aQ61655 478 aaKnown RBP11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Jarid2Q62315 1234 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Tbx22Q8K402 517 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Lrrc42Q8R2U7 421 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Itgb1bp2Q9R000 350 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Trappc8E9PWG2 1437 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Msh6P54276 1358 aaKnown RBP11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Eif5P59325 429 aaKnown RBP11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Tbc1d2bQ3U0J8 965 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Thrap3Q569Z6 951 aaKnown RBP11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 Camsap3Q80VC9 1252 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 PreplQ8C167 725 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 ErmapQ9JLN5 566 aa11.51□□□□□ -0.57
Chd1-201ENSMUST00000024620 AlkP97793 1621 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 BdnfP21237 249 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Tubb4bP68372 445 aaKnown RBP11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Gbp4Q61107 620 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 NexnQ7TPW1 607 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Srgap3Q812A2 1099 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 SyncQ9EPM5 470 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Wdr33Q8K4P0 1330 aaKnown RBP11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Abcc2Q8VI47 1543 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Nf2P46662 596 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Q32P12 615 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Nek5Q7TSC3 627 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Nol11Q8BJW5 723 aaKnown RBP11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 NptxrQ99J85 493 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 AvenQ9D9K3 342 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Osbpl5Q9ER64 874 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Elf2Q9JHC9 593 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Nek4Q9Z1J2 792 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Prex2Q3LAC4 1598 aa11.5□□□□□ -0.57
Chd1-201ENSMUST00000024620 Trove2O08848 538 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Bach1P97302 739 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Nucb1Q02819 459 aaKnown RBP11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Aldh8a1Q8BH00 487 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 BlmhQ8R016 455 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Znf445Q8R2V3 986 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Slc52a2Q9D8F3 450 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Polr1aO35134 1717 aaKnown RBP11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Tax1bp1Q3UKC1 814 aaKnown RBP11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Wdr3Q8BHB4 942 aaKnown RBP11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ppfia2Q8BSS9 1257 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Tmem87aQ8BXN9 555 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Atp1b4Q99ME6 356 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Npc1l1Q6T3U4 1333 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Hmx1O70218 332 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Chpf2Q3UU43 768 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 AnlnQ8K298 1121 aaKnown RBP11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Usp33Q8R5K2 909 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Fam76aQ922G2 307 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Mrps9Q9D7N3 390 aaKnown RBP11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Inpp5dQ9ES52 1191 aa11.49□□□□□ -0.57
Chd1-201ENSMUST00000024620 Trpm2Q91YD4 1506 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Cep85lA0A1W2P884 806 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Sap30bpQ02614 308 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ccdc102aQ3TMW1 549 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 LbrQ3U9G9 626 aaKnown RBP11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Spag9Q58A65 1321 aaKnown RBP11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Kdm3bQ6ZPY7 1562 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Slc8a1P70414 970 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Slc30a9Q5IRJ6 567 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Nlrp4fQ66X05 959 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Mphosph10Q810V0 681 aaKnown RBP11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Frmd3Q8BHD4 595 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Gdap1l1Q8VE33 370 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Snw1Q9CSN1 536 aaKnown RBP11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 AatkQ80YE4 1365 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Mapkbp1Q6NS57 1503 aa11.48□□□□□ -0.57
Chd1-201ENSMUST00000024620 Srpk2O54781 681 aaKnown RBP11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Rnf20Q5DTM8 973 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Gga2Q6P5E6 603 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ppp6r3Q922D4 844 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Trim42Q9D2H5 723 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 LlphQ9D945 130 aaKnown RBP11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Chic2Q9D9G3 165 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Ttc37F8VPK0 1563 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Elf1Q60775 612 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Armcx6Q8K3A6 301 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Gprasp1Q5U4C1 1347 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Plekhd1B2RPU2 505 aa11.47□□□□□ -0.57
Chd1-201ENSMUST00000024620 Q8C5K5 320 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms