RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Sh3bp1P55194 680 aa14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Noc3lQ8VI84 807 aaKnown RBP14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Mrpl44Q9CY73 333 aaKnown RBP14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 A0A1L1SQF0 893 aa14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Jakmip2D3YXK0 820 aa14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 LyarQ08288 388 aaKnown RBP14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Igflr1Q3U4N7 345 aa14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Ankib1Q6ZPS6 1085 aa14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Cep120Q7TSG1 988 aa14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 MicalclQ9D5U9 680 aa14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Ipo7Q9EPL8 1038 aaKnown RBP14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gemin5Q8BX17 1502 aaKnown RBP14.82□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Ets1P27577 440 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Lmbrd2Q8C561 694 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Zeb2Q9R0G7 1215 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Ptcd1Q8C2E4 695 aaKnown RBP14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Cwc15Q9JHS9 229 aaKnown RBP14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Dync1i1O88485 628 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Cep55Q8BT07 462 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Rps6ka5Q8C050 863 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Frat2Q8K025 231 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Rad50P70388 1312 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Kif24Q6NWW5 1356 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 U2af1l4Q8BGJ9 220 aa14.81□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Tlr7P58681 1050 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Chl1P70232 1209 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Ccdc162pQ0VG85 912 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Ankrd40Q5SUE8 363 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Rnf187Q8BFX1 236 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Bicc1Q99MQ1 977 aaKnown RBP14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Speer4bQ9D9F7 267 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm21663A0A0G2JE01 267 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm7361D3Z6R1 267 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 5031410I06RikE9Q4E0 267 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm1979E9QAN3 267 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm5862K7N5V5 267 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm10220K7N660 267 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Larp1Q6ZQ58 1072 aaKnown RBP14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Nat10Q8K224 1024 aaKnown RBP14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Idi1P58044 227 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Zswim4Q8C7B8 1101 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Mtmr3Q8K296 1196 aa14.8□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm21698A0A087WQP8 267 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm21671G3UY31 267 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Nap1l1P28656 391 aaKnown RBP14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Vps54Q5SPW0 977 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Pde1cQ64338 706 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Ccdc82Q6PG04 518 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 TbcaP48428 108 aaKnown RBP14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Tnni2P13412 182 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Me3Q8BMF3 604 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Iqca1Q9CUL5 857 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Rbm33Q9CXK9 1231 aaKnown RBP14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Elf2Q9JHC9 593 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Usp32F8VPZ3 1604 aa14.79□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Cep112Q5PR68 954 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Unc5clQ6R653 518 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Grm8P47743 908 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Smc2Q8CG48 1191 aaKnown RBP14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Tmem132aQ922P8 1018 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Dip2bQ3UH60 1574 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 PplQ9R269 1755 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Gm42641I6L9G2 585 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Cd22P35329 862 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 TrhQ62361 256 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Pnpla2Q8BJ56 486 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 AtripQ8BMG1 785 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Lrrfip2Q91WK0 415 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 RictorQ6QI06 1708 aa14.78□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Dnajc25A2ALW5 357 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Rufy1Q8BIJ7 712 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Vps16Q920Q4 839 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Sirt1Q923E4 737 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Brpf3B2KF05 1204 aaKnown RBP14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Abcd1P48410 736 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Pkp1P97350 728 aaKnown RBP14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Nom1Q3UFM5 854 aaKnown RBP14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Leo1Q5XJE5 667 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Slc39a6Q8C145 765 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 CenphQ9QYM8 241 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Nfe2l3Q9WTM4 660 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Mx2Q9WVP9 655 aa14.77□□□□□ -0.04
Clcn3-201ENSMUST00000004430 Nckap5lQ6GQX2 1323 aa14.77□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Znf568E9PYI1 671 aa14.77□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Dnm1P39053 867 aa14.77□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Frmpd2A0A140LI67 1392 aa14.77□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Igsf3Q6ZQA6 1194 aa14.77□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Ccdc12Q8R344 166 aaKnown RBP14.77□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Gm21680A0A0G2JGR8 267 aa14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Elmsan1E9Q2I4 1089 aaKnown RBP14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Ncbp1Q3UYV9 790 aaKnown RBP14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Psmb7P70195 277 aa14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Gsdma2Q32M21 443 aa14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 4930504O13RikQ8C5Z9 145 aa14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 GckrQ91X44 587 aa14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 4930548H24RikQ9D496 437 aa14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Mybbp1aQ7TPV4 1344 aaKnown RBP14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Ces1hD3Z298 562 aa14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Ppp1r10Q80W00 888 aaKnown RBP14.76□□□□□ -0.05
Clcn3-201ENSMUST00000004430 Podxl2Q8CAE9 603 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms