RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 FGFBP1Q14512 234 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 ALG10BQ5I7T1 473 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 CCDC28AQ8IWP9 274 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 PATE1Q8WXA2 126 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 KXD1Q9BQD3 176 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF559Q9BR84 538 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 DPCDQ9BVM2 203 aaPredicted RBP12.71□□□□□ -0.38
PHGDH-233ENST00000642021 C2orf42Q9NWW7 574 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 MRPL39Q9NYK5 338 aaKnown RBP12.71□□□□□ -0.38
PHGDH-233ENST00000642021 GNG8Q9UK08 70 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 G3V3Q6 166 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 K7EQS6 105 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 TOXO94900 526 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 MPC2O95563 127 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 PRKACAP17612 351 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 SLC6A6P31641 620 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 PSG6Q00889 435 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 BTN2A1Q7KYR7 527 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 OR52R1Q8NGF1 315 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 SLC22A18Q96BI1 424 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 CTHRC1Q96CG8 243 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 DLL4Q9NR61 685 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 DNAJB12Q9NXW2 375 aaKnown RBP12.7□□□□□ -0.38
PHGDH-233ENST00000642021 ACTR10Q9NZ32 417 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 C2orf16Q68DN1 1984 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 MEIKINA0A087WXM9 373 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 SELENOFO60613 162 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 CTSBP07858 339 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 SELENOPP49908 381 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 B2MP61769 119 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 PITPNAQ00169 270 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 GPR18Q14330 331 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 KIR2DS3Q14952 304 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 POU4F3Q15319 338 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 NDUFAF6Q330K2 333 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 HES5Q5TA89 166 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 FIP1L1Q6UN15 594 aaKnown RBP12.7□□□□□ -0.38
PHGDH-233ENST00000642021 ABHD13Q7L211 337 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 SERPINA12Q8IW75 414 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF671Q8TAW3 534 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 SNX33Q8WV41 574 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 ANKRD9Q96BM1 317 aaPredicted RBP12.7□□□□□ -0.38
PHGDH-233ENST00000642021 NMNAT3Q96T66 252 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 SLC25A18Q9H1K4 315 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 NOX4Q9NPH5 578 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 ATPIF1Q9UII2 106 aa12.7□□□□□ -0.38
PHGDH-233ENST00000642021 CIB4A0PJX0 185 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 URADA6NGE7 173 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ACOD1A6NK06 481 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 C4orf47A7E2U8 309 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GRXCR1A8MXD5 290 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 HRKO00198 91 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF254O75437 659 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 OR2T7P0C7T2 308 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 PTHLHP12272 177 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 EDNRAP25101 427 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GBX2P52951 348 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 CLDN12P56749 244 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 VSX2P58304 361 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ZSWIM7Q19AV6 140 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 TMEM196Q5HYL7 178 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ARHGAP11AQ6P4F7 1023 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 Q6ZTK2 550 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 SLC35F2Q8IXU6 374 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF527Q8NB42 609 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 CAMKVQ8NCB2 501 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 OR11G2Q8NGC1 345 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 OR2T27Q8NH04 317 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 RPLP0P6Q8NHW5 317 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 SMIM4Q8WVI0 70 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 HGDQ93099 445 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ZFYVE21Q9BQ24 234 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 LYRM4Q9HD34 91 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 POT1Q9NUX5 634 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 KNL1Q8NG31 2342 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ARPC4-TTLL3A0A0A6YYG9 625 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 LINC00862A6NCI5 91 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 FAM171A2A8MVW0 826 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 PRR32B1ATL7 298 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 SSNA1O43805 119 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ARL6IP5O75915 188 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 NKX2-2O95096 273 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 CFDP00746 253 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 SERPINA3P01011 423 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 IFNGP01579 166 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 POU4F2Q12837 409 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 FAM199XQ6PEV8 388 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 KIRREL2Q6UWL6 708 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 LINC00114Q6XXX2 140 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 CMIPQ8IY22 773 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 CNN2Q99439 309 aaKnown RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GPR174Q9BXC1 333 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 NARFLQ9H6Q4 476 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 NRIP3Q9NQ35 241 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 OBP2AQ9NY56 170 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 COPZ2Q9P299 210 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms