RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ZNF267Q14586 743 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-221ENST00000640341 KIRREL2Q6UWL6 708 aa13.43□□□□□ -0.26
SCARB2-221ENST00000640341 ZNF767PQ75MW2 155 aa13.43□□□□□ -0.26
SCARB2-221ENST00000640341 MS4A15Q8N5U1 240 aa13.43□□□□□ -0.26
SCARB2-221ENST00000640341 RBM18Q96H35 190 aaKnown RBP13.43□□□□□ -0.26
SCARB2-221ENST00000640341 FOXN4Q96NZ1 517 aa13.43□□□□□ -0.26
SCARB2-221ENST00000640341 CNN2Q99439 309 aaKnown RBP13.43□□□□□ -0.26
SCARB2-221ENST00000640341 TCEAL2Q9H3H9 227 aaPredicted RBP13.43□□□□□ -0.26
SCARB2-221ENST00000640341 GTF2A1LQ9UNN4 478 aa13.43□□□□□ -0.26
SCARB2-221ENST00000640341 BRWD1Q9NSI6 2320 aa13.43□□□□□ -0.26
SCARB2-221ENST00000640341 A0A0A6YYC8 382 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 I3L1I5 382 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 ITPRIPL2Q3MIP1 535 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 TMPRSS11FQ6ZWK6 438 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 SLC35F2Q8IXU6 374 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 CMTM4Q8IZR5 234 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 HERVK_113Q902F9 699 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 CLEC4MQ9H2X3 399 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 GHITMQ9H3K2 345 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 SRA1Q9HD15 236 aaKnown RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 EVA1BQ9NVM1 165 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 A0A1B0GTH9 108 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 BRINP1O60477 761 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 RAD1O60671 282 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 ARL6IP5O75915 188 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 PTBP1P26599 531 aaKnown RBP eCLIP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 OC90Q02509 493 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 DMKNQ6E0U4 476 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 ZNF680Q8NEM1 530 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 KCTD12Q96CX2 325 aaKnown RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 ZFP64Q9NPA5 681 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 TEX46H3BTG2 121 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 UBL3O95164 117 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 IFNA16P05015 189 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 RIN1Q13671 783 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 ZNHIT3Q15649 155 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 PRICKLE4Q2TBC4 344 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 ZBTB37Q5TC79 503 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 TPRA1Q86W33 373 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 C1orf216Q8TAB5 229 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 WDR92Q96MX6 357 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 UBL7Q96S82 380 aaPredicted RBP13.42□□□□□ -0.26
SCARB2-221ENST00000640341 SEC22CQ9BRL7 303 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 SEMA4CQ9C0C4 833 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 DUSP22Q9NRW4 184 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 SLCO1C1Q9NYB5 712 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 NUBP2Q9Y5Y2 271 aa13.42□□□□□ -0.26
SCARB2-221ENST00000640341 TDRD6O60522 2096 aaKnown RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 PLRG1O43660 514 aaKnown RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 IGKV1D-16P01601 117 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 CELA2BP08218 269 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 ANGPT1Q15389 498 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 ARHGAP11AQ6P4F7 1023 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 CHMP1BQ7LBR1 199 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 FTMTQ8N4E7 242 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 OR51Q1Q8NH59 317 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 LRIT1Q9P2V4 623 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 IKZF2Q9UKS7 526 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 A0A0B4J2E0 115 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 A0A1B0GX12 115 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 TVP23AA6NH52 213 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 K7EQS6 105 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 ZNF593O00488 134 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 GPR171O14626 319 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 ARPC1BO15143 372 aaKnown RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 F13BP05160 661 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 OR8G3PP0DMU2 310 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 CENPAP49450 140 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 BTG1P62324 171 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 CDK5R1Q15078 307 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 CLPPQ16740 277 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 TMEM255AQ5JRV8 349 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 TEX261Q6UWH6 196 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 C7orf61Q8IZ16 206 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 OR52I2Q8NH67 350 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 SMIM19Q96E16 107 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 SCMH1Q96GD3 660 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 MSANTD3Q96H12 275 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 MYADMQ96S97 322 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 MKKSQ9NPJ1 570 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 ST6GALNAC2Q9UJ37 374 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 U3KQ87 197 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 MEIS3P1A6NDR6 274 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 LEUTXA8MZ59 168 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 LINC01565O15544 149 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 LYPD3O95274 346 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 CSTAP01040 98 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 ENPP1P22413 925 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 NTSR1P30989 418 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 PER3P56645 1201 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 KCNAB1Q14722 419 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 KANSL1Q7Z3B3 1105 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 OR4C3Q8NH37 302 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 LMF1Q96S06 567 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 RANBP3Q9H6Z4 567 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-221ENST00000640341 ZNF224Q9NZL3 707 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 KLF15Q9UIH9 416 aa13.41□□□□□ -0.26
SCARB2-221ENST00000640341 PTP4A3O75365 173 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms