RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 IL7RP16871 459 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 EPS8Q12929 822 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 GNA13Q14344 377 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 CASP12Q6UXS9 341 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 CXXC5Q7LFL8 322 aaKnown RBP16.21■□□□□ 0.19
CLN6-220ENST00000637450 DEPDC4Q8N2C3 294 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 MUC15Q8N387 334 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 OR10H5Q8NGA6 315 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 WDR60Q8WVS4 1066 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 C1QTNF6Q9BXI9 259 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 CENPHQ9H3R5 247 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 SLC7A10Q9NS82 523 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 UPB1Q9UBR1 384 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 POU2F3Q9UKI9 436 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 PRDM4Q9UKN5 801 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 ZC3H12DA2A288 527 aaKnown RBP16.2■□□□□ 0.18
CLN6-220ENST00000637450 M0R1B8 84 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 NR2F1P10589 423 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 FABP6P51161 128 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 MAPK11Q15759 364 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 GSTA3Q16772 222 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 CEP85LQ5SZL2 805 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 MRPL2Q5T653 305 aaKnown RBP16.2■□□□□ 0.18
CLN6-220ENST00000637450 TSPO2Q5TGU0 170 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 PAQR6Q6TCH4 344 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 B3GLCTQ6Y288 498 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 FBXL14Q8N1E6 418 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 C17orf78Q8N4C9 275 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 C1orf162Q8NEQ5 155 aaPredicted RBP16.2■□□□□ 0.18
CLN6-220ENST00000637450 SPATA3Q8NHX4 192 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 PAIP2Q9BPZ3 127 aaKnown RBP16.2■□□□□ 0.18
CLN6-220ENST00000637450 WDR55Q9H6Y2 383 aaPredicted RBP16.2■□□□□ 0.18
CLN6-220ENST00000637450 SLC17A5Q9NRA2 495 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 YAE1D1Q9NRH1 226 aa16.2■□□□□ 0.18
CLN6-220ENST00000637450 IGHV4-30-2A0A087WSY4 118 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 A0A096LNT2 108 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 KRT75O95678 551 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 UQCRBP14927 111 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 EPHA3P29320 983 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 NUDT6P53370 316 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 DSCR9P59020 149 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 RAB35Q15286 201 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 C1QTNF12Q5T7M4 302 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 C9orf135Q5VTT2 229 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 ZNF544Q6NX49 715 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 HIPK1Q86Z02 1210 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 PEX5LQ8IYB4 626 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 ZNF440Q8IYI8 595 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 ZIC4Q8N9L1 334 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 GLB1L3Q8NCI6 653 aaPredicted RBP16.19■□□□□ 0.18
CLN6-220ENST00000637450 PNPT1Q8TCS8 783 aaKnown RBP16.19■□□□□ 0.18
CLN6-220ENST00000637450 TMEM45BQ96B21 275 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 ZBTB9Q96C00 473 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 ZBTB18Q99592 522 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 RLIMQ9NVW2 624 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 AMDHD2Q9Y303 409 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 FBN3Q75N90 2809 aa16.19■□□□□ 0.18
CLN6-220ENST00000637450 CDHR4A6H8M9 788 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 LIPT2A6NK58 231 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 TRPC5OSA6NMA1 111 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 HDAC3O15379 428 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 GPRIN2O60269 458 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 SNNO75324 88 aaPredicted RBP16.18■□□□□ 0.18
CLN6-220ENST00000637450 GPIP06744 558 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 CXCR1P25024 350 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 MPGP29372 298 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 ACAA2P42765 397 aaKnown RBP16.18■□□□□ 0.18
CLN6-220ENST00000637450 MVDP53602 400 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 SLC25A3Q00325 362 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 TGFBR3Q03167 851 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 CEACAM7Q14002 265 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 OTUD3Q5T2D3 398 aaPredicted RBP16.18■□□□□ 0.18
CLN6-220ENST00000637450 HHATQ5VTY9 493 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 TMEM99Q8N816 258 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 SF3B5Q9BWJ5 86 aaKnown RBP16.18■□□□□ 0.18
CLN6-220ENST00000637450 SLC6A13Q9NSD5 602 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 THAP1Q9NVV9 213 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 MXRA5Q9NR99 2828 aa16.18■□□□□ 0.18
CLN6-220ENST00000637450 STAB1Q9NY15 2570 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 RTTNQ86VV8 2226 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 FAM234BA2RU67 622 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 ELOA3DA6NLF2 546 aaPredicted RBP16.17■□□□□ 0.18
CLN6-220ENST00000637450 H7C417 338 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 RFXANKO14593 260 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 AKR7A3O95154 331 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 IL6P05231 212 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 GKN3PP0CG01 181 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 WDR4P57081 412 aaKnown RBP16.17■□□□□ 0.18
CLN6-220ENST00000637450 ELOA3BQ3SY89 546 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 LIN52Q52LA3 116 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 CLEC2AQ6UVW9 174 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 VRK2Q86Y07 508 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 ANKRD42Q8N9B4 389 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 ELOA3Q8NG57 546 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 OR9K2Q8NGE7 335 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 OR52P1PQ8NH57 321 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 BOD1Q96IK1 185 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 ZNF385AQ96PM9 386 aaKnown RBP16.17■□□□□ 0.18
CLN6-220ENST00000637450 PIF1Q9H611 641 aa16.17■□□□□ 0.18
CLN6-220ENST00000637450 FKRPQ9H9S5 495 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms