RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 OPN4Q9UHM6 478 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 FBXL4Q9UKA2 621 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 FOXJ3Q9UPW0 622 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 PCDHGA5Q9Y5G8 931 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 V9GY05 133 aa13.65□□□□□ -0.22
CACNA1A-220ENST00000635988 TRAV27A0A087WT01 109 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 ANXA2P2A6NMY6 339 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 GYPBP06028 91 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 RAB3AP20336 220 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 P2RX1P51575 399 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 CLDN2P57739 230 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 PPP2CBP62714 309 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 PPP2CAP67775 309 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 CDK3Q00526 305 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 DUSP5Q16690 384 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 MRPL2Q5T653 305 aaKnown RBP13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 OR2L13Q8N349 312 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF454Q8N9F8 522 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 OR5M9Q8NGP3 310 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 EVA1AQ9H8M9 152 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 SERTAD3Q9UJW9 196 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 ETV7Q9Y603 341 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 HEATR5BQ9P2D3 2071 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 CISD3P0C7P0 127 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 GKN3PP0CG01 181 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 UBXN2BQ14CS0 331 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 CDH26Q8IXH8 852 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 SLC35F2Q8IXU6 374 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 SYNPRQ8TBG9 265 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 HAVCR1Q96D42 359 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF416Q9BWM5 594 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 TMEM27Q9HBJ8 222 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 PCDHB16Q9NRJ7 776 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 HCFC1R1Q9NWW0 138 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 GNG8Q9UK08 70 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 ICAM5Q9UMF0 924 aa13.64□□□□□ -0.23
CACNA1A-220ENST00000635988 EDDM13A0A1B0GTR0 161 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 GPR89AB7ZAQ6 455 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 SDC3O75056 442 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 GPR89BP0CG08 455 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 PPM1AP35813 382 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 ART1P52961 327 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 ELAVL3Q14576 367 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 MFSD9Q8NBP5 474 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 PMM1Q92871 262 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 GCDHQ92947 438 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 ZMYND19Q96E35 227 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 TCEAL4Q96EI5 215 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 INSM2Q96T92 566 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF559Q9BR84 538 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 XKR8Q9H6D3 395 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 SLC6A20Q9NP91 592 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF281Q9Y2X9 895 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 MDC1Q14676 2089 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 CENPVL1A0A0U1RR11 272 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 POM121CA8CG34 1229 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 F5H5P2 479 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 LGALS8O00214 317 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 NTHL1P78549 312 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 SIM1P81133 766 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 RBMS2Q15434 407 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 MPPED2Q15777 294 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 HNRNPA1L2Q32P51 320 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 NDUFAF6Q330K2 333 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 PWWP2BQ6NUJ5 590 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 RFLNBQ8N5W9 214 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF433Q8N7K0 673 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 OR5T2Q8NGG2 359 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 OR1S1Q8NH92 325 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 OR14A16Q8NHC5 309 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 COL26A1Q96A83 441 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 MIB2Q96AX9 1013 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 C10orf90Q96M02 699 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 PDCD1LG2Q9BQ51 273 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 MS4A7Q9GZW8 240 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 SLITRK2Q9H156 845 aa13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 C6orf106Q9H6K1 298 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 MEPEQ9NQ76 525 aaPredicted RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 APOBEC3BQ9UH17 382 aaKnown RBP13.63□□□□□ -0.23
CACNA1A-220ENST00000635988 FXYD6-FXYD2A0A087WZ82 144 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 PIN1P1O15428 100 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 PCDH8O95206 1070 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 ADH1AP07327 375 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 BTN3A2P78410 334 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 CBFBQ13951 182 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 ZNF169Q14929 603 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 PON3Q15166 354 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 ZMYND11Q15326 602 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 MLF2Q15773 248 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 GPR162Q16538 588 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 FNDC3BQ53EP0 1204 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 NHLRC1Q6VVB1 395 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 SERPINA12Q8IW75 414 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 OR52E2Q8NGJ4 325 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 TNFRSF13CQ96RJ3 184 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 GFI1Q99684 422 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 TTTY10Q9BZA0 68 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
CACNA1A-220ENST00000635988 DNTTIP1Q9H147 329 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms