RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 FPR1P21462 350 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 EEF1B2P24534 225 aaKnown RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 MST1P26927 711 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 DNAJA1P31689 397 aaKnown RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 IFNA8P32881 189 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 SLC1A3P43003 542 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 RANBP1P43487 201 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 ARHGDIAP52565 204 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 FOXK1P85037 733 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 ALDH6A1Q02252 535 aaKnown RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 KLRB1Q12918 225 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 FOXF1Q12946 379 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 NEDD8Q15843 81 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 INAQ16352 499 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 HYAL4Q2M3T9 481 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 PLPPR5Q32ZL2 321 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 IQCCQ4KMZ1 466 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 SYT6Q5T7P8 510 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 RAET1LQ5VY80 246 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 RPUSD3Q6P087 351 aaKnown RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF843Q8N446 348 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 FAM109AQ8N4B1 249 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 LSMEM1Q8N8F7 131 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 FAM83FQ8NEG4 500 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 OR5M1Q8NGP8 315 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 PHF10Q8WUB8 498 aaKnown RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 IPCEF1Q8WWN9 437 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 S100ZQ8WXG8 99 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 ST8SIA1Q92185 356 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 PRRC1Q96M27 445 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 TAAR6Q96RI8 345 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 PIP5K1AQ99755 562 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 FNDC11Q9BVV2 318 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 DEFB127Q9H1M4 99 aa13.08□□□□□ -0.32
LINC00339-208ENST00000634934 TSPAN10Q9H1Z9 355 aaPredicted RBP13.08□□□□□ -0.32
LINC00339-208ENST00000634934 HEATR5AQ86XA9 2040 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 TRAPPC13A5PLN9 417 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 FFAR1O14842 300 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 OR5F1O95221 314 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 IMPDH2P12268 514 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 TACR3P29371 465 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 CDH12P55289 794 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SLC35A2P78381 396 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SPIBQ01892 262 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 CDK5R2Q13319 367 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SLC10A1Q14973 349 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 CTU2Q2VPK5 515 aaKnown RBP13.07□□□□□ -0.32
LINC00339-208ENST00000634934 ALG10BQ5I7T1 473 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 WIPI1Q5MNZ9 446 aaPredicted RBP13.07□□□□□ -0.32
LINC00339-208ENST00000634934 OR2T5Q6IEZ7 315 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF613Q6PF04 617 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 ULK3Q6PHR2 472 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SLC16A12Q6ZSM3 486 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 PRSS48Q7RTY5 328 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 GRINAQ7Z429 371 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 PARP8Q8N3A8 854 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SVOPQ8N4V2 548 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 Q8NA96 180 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 OR2T29Q8NH02 315 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 ZBTB8AQ96BR9 441 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 C3orf49Q96BT1 292 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SLC41A3Q96GZ6 507 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 DACH2Q96NX9 599 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SIGLEC11Q96RL6 698 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 NPAS1Q99742 590 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 APOL4Q9BPW4 351 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 DCUN1D5Q9BTE7 237 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 WDR12Q9GZL7 423 aaKnown RBP13.07□□□□□ -0.32
LINC00339-208ENST00000634934 NDRG4Q9ULP0 352 aaKnown RBP13.07□□□□□ -0.32
LINC00339-208ENST00000634934 SLC7A7Q9UM01 511 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 A4GNTQ9UNA3 340 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 TESMINQ9Y4I5 508 aa13.07□□□□□ -0.32
LINC00339-208ENST00000634934 A0A0B4J2E0 115 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 A0A1B0GX12 115 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF99A8MXY4 864 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 BCKDKO14874 412 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 SULT1C4O75897 302 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 WISP1O95388 367 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 CRYABP02511 175 aaKnown RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 HPNP05981 417 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 EIF1P41567 113 aaKnown RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 BMXP51813 675 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 POLR2HP52434 150 aaKnown RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 ZIK1Q3SY52 487 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 FAHD1Q6P587 224 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 FAM180AQ6UWF9 173 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 DCDC5Q6ZRR9 648 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 GDF7Q7Z4P5 450 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 LSRQ86X29 649 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 CISD2Q8N5K1 135 aaKnown RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 POC1BQ8TC44 478 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 DNAJA4Q8WW22 397 aaPredicted RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 NR4A3Q92570 626 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 MRGPRX4Q96LA9 322 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 SFXN2Q96NB2 322 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 PIGQQ9BRB3 760 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 OR2B2Q9GZK3 357 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 POLR2J2Q9GZM3 115 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms