RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 PNPLA2Q96AD5 504 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 NTNG2Q96CW9 530 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SPACA9Q96E40 222 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 IP6K3Q96PC2 410 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 NPAS1Q99742 590 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TEX12Q9BXU0 123 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 PRRG3Q9BZD7 231 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ADAM19Q9H013 955 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC25A19Q9HC21 320 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 KLRF1Q9NZS2 232 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SIGLEC7Q9Y286 467 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 YARS2Q9Y2Z4 477 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TPRKBQ9Y3C4 175 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 CDH10Q9Y6N8 788 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 USP9XQ93008 2570 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 UNC119BA6NIH7 251 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 EFCAB9A8MZ26 197 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 LRRN3E7EW58 273 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 PTGES3LE9PB15 166 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TP53I11O14683 189 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 PRKYO43930 277 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 GMFGO60234 142 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 FAM20BO75063 409 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SOX3P41225 446 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 C17orf67Q0P5P2 114 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 FCRLBQ6BAA4 426 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 RPL13AP3Q6NVV1 102 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 JMJD6Q6NYC1 403 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF773Q6PK81 442 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 OPN5Q6U736 354 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 RAB43Q86YS6 212 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ZNF540Q8NDQ6 660 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 OR52L1Q8NGH7 329 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 OR8J1Q8NGP2 316 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 OR13C2Q8NGS9 318 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 B4GALNT2Q8NHY0 566 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 FANK1Q8TC84 345 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 ADAMTS17Q8TE56 1095 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TMIGD2Q96BF3 282 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TSSK6Q9BXA6 273 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC19A3Q9BZV2 496 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 RBM38Q9H0Z9 239 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 METTL7AQ9H8H3 244 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 C12orf10Q9HB07 376 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 RYDENQ9NUL5 291 aaKnown RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TBC1D23Q9NUY8 699 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 FKBP14Q9NWM8 211 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 P4HTMQ9NXG6 502 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 TVP23BQ9NYZ1 205 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 IL20RAQ9UHF4 553 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 FBXL4Q9UKA2 621 aa8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 CHCHD2Q9Y6H1 151 aaPredicted RBP8.62□□□□□ -1.03
PDLIM5-223ENST00000627587 FREM3P0C091 2139 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 HTR3EA5X5Y0 456 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 CDC40O60508 579 aaKnown RBP eCLIP8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 PTP4A3O75365 173 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 RCBTB2O95199 551 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 BMP7P18075 431 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 PCMT1P22061 227 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SSR4P51571 173 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 NUDT6P53370 316 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SUMO3P55854 103 aaPredicted RBP8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SNRPGP62308 76 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 MVKQ03426 396 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 CLEC12AQ5QGZ9 265 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 TMEM201Q5SNT2 666 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 OR5M10Q6IEU7 315 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 H3F3CQ6NXT2 135 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC30A6Q6NXT4 461 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC46A3Q7Z3Q1 461 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 BCDIN3DQ7Z5W3 292 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 OAFQ86UD1 273 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 RPS19BP1Q86WX3 136 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 DND1Q8IYX4 353 aaKnown RBP8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SPARTQ8N0X7 666 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 LRRC17Q8N6Y2 441 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 GPR119Q8TDV5 335 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 ASB15Q8WXK1 588 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SLC38A2Q96QD8 506 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 IL4I1Q96RQ9 567 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 TMEM43Q9BTV4 400 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 OR52D1Q9H346 318 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 CDCP1Q9H5V8 836 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 HHATLQ9HCP6 504 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 VCX3AQ9NNX9 186 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SH2D2AQ9NP31 389 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 AMBNQ9NP70 447 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 CCNB1IP1Q9NPC3 277 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 SDHAF3Q9NRP4 125 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 PLCXD1Q9NUJ7 323 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 CLN6Q9NWW5 311 aa8.61□□□□□ -1.03
PDLIM5-223ENST00000627587 ESPL1Q14674 2120 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SPTBN1Q01082 2364 aaKnown RBP8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 TRAV27A0A087WT01 109 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 SH3D21A4FU49 640 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 WIPF3A6NGB9 483 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 BHLHE40O14503 412 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 HCN1O60741 890 aa8.6□□□□□ -1.03
PDLIM5-223ENST00000627587 TACR3P29371 465 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms