RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 RNF31Q96EP0 1072 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 DDOQ99489 341 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 NANSQ9NR45 359 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 OCIAD1Q9NX40 245 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 TOR4AQ9NXH8 423 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 BABAM2Q9NXR7 383 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 NPFFR2Q9Y5X5 522 aa20.11■□□□□ 0.81
PNKP-220ENST00000627232 PNMA8CA0A1B0GUJ8 204 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 HLA-DPB1P04440 258 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 GP1BBP13224 206 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 SLC26A5P58743 744 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 SLC35D3Q5M8T2 416 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 PAPD4Q6PIY7 484 aaKnown RBP20.1■□□□□ 0.81
PNKP-220ENST00000627232 TMEM205Q6UW68 189 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 DCDC5Q6ZRR9 648 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 CPEB2Q7Z5Q1 589 aaKnown RBP20.1■□□□□ 0.81
PNKP-220ENST00000627232 KLBQ86Z14 1044 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 GPALPP1Q8IXQ4 340 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 C10orf53Q8N6V4 93 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 TMEM105Q8N8V8 129 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 LRRC75AQ8NAA5 344 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 POMGNT2Q8NAT1 580 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 SDR9C7Q8NEX9 313 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 OR10H4Q8NGA5 316 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 SMPDL3BQ92485 455 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 TMEM203Q969S6 136 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 ZNF524Q96C55 264 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 SPSB2Q99619 263 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 LPAR4Q99677 370 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 APMAPQ9HDC9 416 aa20.1■□□□□ 0.81
PNKP-220ENST00000627232 C19orf25Q9UFG5 118 aaPredicted RBP20.1■□□□□ 0.81
PNKP-220ENST00000627232 TECTAO75443 2155 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 MPDZO75970 2070 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 CPNE3O75131 537 aaKnown RBP20.09■□□□□ 0.81
PNKP-220ENST00000627232 CLUP10909 449 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 NAGAP17050 411 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 CXCR1P25024 350 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 ITPKBP27987 946 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 UQCRC1P31930 480 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 FOXL2P58012 376 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 IL10RAQ13651 578 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 C22orf42Q6IC83 251 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 NPEPL1Q8NDH3 523 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 MOSPD2Q8NHP6 518 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 SLC25A46Q96AG3 418 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 COX4I2Q96KJ9 171 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 TIMP4Q99727 224 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 WDR77Q9BQA1 342 aaPredicted RBP20.09■□□□□ 0.81
PNKP-220ENST00000627232 NMNAT2Q9BZQ4 307 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 FKRPQ9H9S5 495 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 SMURF1Q9HCE7 757 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 TBCCD1Q9NVR7 557 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 ZNF229Q9UJW7 825 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 YARS2Q9Y2Z4 477 aaKnown RBP20.09■□□□□ 0.81
PNKP-220ENST00000627232 ADAM18Q9Y3Q7 739 aa20.09■□□□□ 0.81
PNKP-220ENST00000627232 IQCMA0A1B0GVH7 501 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 MEN1O00255 615 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 CDRT1O95170 752 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 MT-ND5P03915 603 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 CD14P08571 375 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 CD53P19397 219 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 CELP19835 753 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 TAS2R43P59537 309 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 FABP5Q01469 135 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 RUNX1T1Q06455 604 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 ZFP36L1Q07352 338 aaKnown RBP20.08■□□□□ 0.81
PNKP-220ENST00000627232 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.08■□□□□ 0.81
PNKP-220ENST00000627232 TBC1D25Q3MII6 688 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 MRPL14Q6P1L8 145 aaKnown RBP20.08■□□□□ 0.81
PNKP-220ENST00000627232 CENPSQ8N2Z9 138 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 ARIH2OSQ8N7S6 290 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 ZFP41Q8N8Y5 198 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 MINDY2Q8NBR6 621 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 AGBL5Q8NDL9 886 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 OR5L2Q8NGL0 311 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 MOGAT1Q96PD6 335 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 DEPDC7Q96QD5 511 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 KLHDC3Q9BQ90 382 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 KATNB1Q9BVA0 655 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 MROQ9BYG7 248 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 BARHL1Q9BZE3 327 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 WDR54Q9H977 334 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 ISG20L2Q9H9L3 353 aaKnown RBP20.08■□□□□ 0.81
PNKP-220ENST00000627232 TRIM36Q9NQ86 728 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 SNTG1Q9NSN8 517 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 FAIMQ9NVQ4 179 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 FBXL4Q9UKA2 621 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 PCDHGB7Q9Y5F8 929 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 NOX1Q9Y5S8 564 aa20.08■□□□□ 0.81
PNKP-220ENST00000627232 ASCC3Q8N3C0 2202 aaKnown RBP20.07■□□□□ 0.8
PNKP-220ENST00000627232 TMEM221A6NGB7 291 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 M0R296 226 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 AGRPO00253 132 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 SCO2O43819 266 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 TXNDC12O95881 172 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 AQP2P41181 271 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 DIO1P49895 249 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 ERVK-25P63136 954 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 LTBQ06643 244 aa20.07■□□□□ 0.8
PNKP-220ENST00000627232 CCDC190Q86UF4 302 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms