RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 DOT1LQ8TEK3 1739 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ANTXRLA6NF34 631 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 FAM183AA6NL82 134 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 DVL2O14641 736 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SLC6A8P48029 635 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 GPR85P60893 370 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 RPP30P78346 268 aaKnown RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 ZNF266Q14584 549 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 Q499Y3 187 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 VASNQ6EMK4 673 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 XAF1Q6GPH4 301 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 FAM199XQ6PEV8 388 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 PIANPQ8IYJ0 282 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 CMTM8Q8IZV2 173 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 L3MBTL4Q8NA19 623 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 OR4K15Q8NH41 348 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 UBE2FQ969M7 185 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 TAF9BQ9HBM6 251 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SLC22A7Q9Y694 548 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 DLEC1Q9Y238 1755 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 H0YIV9 168 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ARSAP15289 507 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 RAB4AP20338 218 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 WASP42768 502 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 KIR2DL3P43628 341 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 TMEM225Q6GV28 225 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 EGLN2Q96KS0 407 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 JSRP1Q96MG2 331 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 C8orf33Q9H7E9 229 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 PTGES2Q9H7Z7 377 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 PLEKHA3Q9HB20 300 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 PLEKHJ1Q9NW61 149 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 PURGQ9UJV8 347 aaKnown RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 POMT2Q9UKY4 750 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ZAR1LA6NP61 321 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 I6L893 689 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 PEX10O60683 326 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 CYTIPO60759 359 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 STK17BO94768 372 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 GJA1P17302 382 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 NFYBP25208 207 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 OC90Q02509 493 aaPredicted RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 SEMA3BQ13214 749 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 PKDCCQ504Y2 493 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 PLPP4Q5VZY2 271 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 KCNRGQ8N5I3 272 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 KREMEN2Q8NCW0 462 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 FAM213BQ8TBF2 198 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 HERVK_113Q902F9 699 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 GPR78Q96P69 363 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SERINC2Q96SA4 455 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SLC6A17Q9H1V8 727 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 POFUT1Q9H488 388 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 RBPJLQ9UBG7 517 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SLCO3A1Q9UIG8 710 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 LRIT2A6NDA9 550 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 CPN1P15169 458 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ANXA7P20073 488 aaKnown RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 PTAFRP25105 342 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 TAS2R30P59541 319 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 UBE2IP63279 158 aaKnown RBP8.32□□□□□ -1.08
VCL-206ENST00000623461 JAG1P78504 1218 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 LMAN2Q12907 356 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ZNF792Q3KQV3 632 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 ZMAT1Q5H9K5 638 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 SERINC5Q86VE9 423 aa8.32□□□□□ -1.08
VCL-206ENST00000623461 TMEM72A0PK05 275 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 ZNF587BE7ETH6 402 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SYT5O00445 386 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 AQP8O94778 261 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 POU3F3P20264 500 aaPredicted RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 ACSM1Q08AH1 577 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 RAB31Q13636 194 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 ZSCAN4Q8NAM6 433 aaPredicted RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 TOMM40LQ969M1 308 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 TUBB1Q9H4B7 451 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 ADAM29Q9UKF5 820 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 CPED1A4D0V7 1026 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 PEX12O00623 359 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 MBP02144 154 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 ATXN1LP0C7T5 689 aaKnown RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 FPR3P25089 353 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 XCR1P46094 333 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SOX4Q06945 474 aaPredicted RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 TXNDC8Q6A555 127 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 FAHD1Q6P587 224 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 APH1BQ8WW43 257 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 OR2A14Q96R47 310 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 KCNK6Q9Y257 313 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 COL2A1P02458 1487 aaPredicted RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 MSTNO14793 375 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 LEFTY1O75610 366 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 F2P00734 622 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 HMGN2P05204 90 aaKnown RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 HOXB9P17482 250 aaPredicted RBP8.31□□□□□ -1.08
VCL-206ENST00000623461 LAP3P28838 519 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 RAB13P51153 203 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SLC14A1Q13336 389 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 SLC9A3R2Q15599 337 aa8.31□□□□□ -1.08
VCL-206ENST00000623461 LIX1LQ8IVB5 337 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms