RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 CD47Q08722 323 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 GINS1Q14691 196 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 C1orf140Q5VVS0 124 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 SLC25A25Q6KCM7 469 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 C3orf33Q6P1S2 294 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 GTPBP8Q8N3Z3 284 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 OR2T33Q8NG76 320 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 FANK1Q8TC84 345 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 SLC25A43Q8WUT9 341 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 KTI12Q96EK9 354 aaPredicted RBP12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 MRPS26Q9BYN8 205 aaKnown RBP12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 POTEKPQ9BYX7 375 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 DEPPQ9NTK1 212 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 TBC1D23Q9NUY8 699 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 ZNF229Q9UJW7 825 aa12.87□□□□□ -0.35
CLTCL1-212ENST00000622493 SPTBN2O15020 2390 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 KLRC4-KLRK1H3BQV0 150 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 RRP8O43159 456 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 NME2P1O60361 137 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 ADRB1P08588 477 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 ASAH2BP0C7U1 165 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 HK1P19367 917 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 NME2P22392 152 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 RANBP1P43487 201 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 RPS5P46782 204 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 CXCR4P61073 352 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 MYBPC1Q00872 1141 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 FOXO1Q12778 655 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 SELENBP1Q13228 472 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 CDK5R2Q13319 367 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 MFSD13AQ14CX5 517 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 MAD2L1BPQ15013 274 aaPredicted RBP12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 TMEM236Q5W0B7 351 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 B3GNT6Q6ZMB0 384 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 ENTHD1Q8IYW4 607 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 OR2M7Q8NG81 312 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 OR8D4Q8NGM9 314 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 OR13C2Q8NGS9 318 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 OR51A7Q8NH64 312 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 RHOXF1Q8NHV9 184 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 POC1BQ8TC44 478 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 TAAR8Q969N4 342 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 C5orf34Q96MH7 638 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 TSSK6Q9BXA6 273 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 UBQLN3Q9H347 655 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 TUBA8Q9NY65 449 aaPredicted RBP12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 DKKL1Q9UK85 242 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 BAIAP2Q9UQB8 552 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 MYRFQ9Y2G1 1151 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 ASPMQ8IZT6 3477 aa12.86□□□□□ -0.35
CLTCL1-212ENST00000622493 A0A0G2JMM0 328 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 A0A1W2PPB8 328 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 A0A1W2PRS3 328 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 ZC3H12DA2A288 527 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 LRRC3CA6NJW4 275 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 KIR3DP1A8MWS1 328 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 NDUFB2O95178 105 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 WISP1O95388 367 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 AHSA1O95433 338 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 FXYD6P3P58550 94 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 GPR85P60893 370 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 RPS4XP62701 263 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 CSNK2BP67870 215 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 FHL1Q13642 323 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 TMEM44Q2T9K0 475 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 C6orf141Q5SZD1 244 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SULF2Q8IWU5 870 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SPACA3Q8IXA5 215 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 C10orf53Q8N6V4 93 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 TMEM178AQ8NBL3 297 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 OR8J1Q8NGP2 316 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 HDAC2Q92769 488 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SAMD8Q96LT4 415 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SLC38A2Q96QD8 506 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 TNFRSF13CQ96RJ3 184 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SMAD5Q99717 465 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 NPAS1Q99742 590 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 PIGQQ9BRB3 760 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 PTDSS2Q9BVG9 487 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 POLDIP3Q9BY77 421 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.352e-7■■■■■ 39
CLTCL1-212ENST00000622493 B4GALT7Q9UBV7 327 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 HIF3AQ9Y2N7 669 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 MPDZO75970 2070 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 CELSR3Q9NYQ7 3312 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 TRAV27A0A087WT01 109 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 LRRN3E7EW58 273 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 ZIC3O60481 467 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 CLPTM1O96005 669 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 BGLAPP02818 100 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 HIST1H2ABP04908 130 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 HMGN1P05114 100 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 TSPAN19P0C672 248 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SLC6A6P31641 620 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 PLA2G5P39877 138 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 SNRPGP62308 76 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 LTBQ06643 244 aa12.85□□□□□ -0.35
CLTCL1-212ENST00000622493 TOP3AQ13472 1001 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms