RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 NUDT17P0C025 328 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CPN1P15169 458 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TCN1P20061 433 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TPSB2P20231 275 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 GSTM3P21266 225 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 PSMB6P28072 239 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 YWHABP31946 246 aaKnown RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 HLCSP50747 726 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CXCL6P80162 114 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 SLC3A1Q07837 685 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 MFGE8Q08431 387 aaPredicted RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CASP8Q14790 479 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TPSAB1Q15661 275 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 VAMP3Q15836 100 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 PSG3Q16557 428 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ZSWIM7Q19AV6 140 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 GSG1Q2KHT4 349 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CMPK2Q5EBM0 449 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 DCAF12Q5T6F0 453 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 HHATQ5VTY9 493 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 RNASEKQ6P5S7 137 aaKnown RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TMEM107Q6UX40 140 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 DCXRQ7Z4W1 244 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 C17orf78Q8N4C9 275 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CCDC197Q8NCU1 140 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 OR8J2Q8NGG1 315 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 MARCH1Q8TCQ1 289 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TBCKQ8TEA7 893 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ARNTL2Q8WYA1 636 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ELMO1Q92556 727 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 PHYHIPQ92561 330 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 TM4SF19Q96DZ7 209 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CENPKQ9BS16 269 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 PAXXQ9BUH6 204 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 NDEL1Q9GZM8 345 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 RAB1BQ9H0U4 201 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CXXC4Q9H2H0 198 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 MRM3Q9HC36 420 aaKnown RBP3.02□□□□□ -1.93
BRCA1-229ENST00000621897 LYRM4Q9HD34 91 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 NT5MQ9NPB1 228 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF302Q9NR11 478 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 SMOXQ9NWM0 555 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 AHSPQ9NZD4 102 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 MTCH1Q9NZJ7 389 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 P2RX2Q9UBL9 471 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 BCAP29Q9UHQ4 241 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ENPP5Q9UJA9 477 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 ADAM28Q9UKQ2 775 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 VANGL2Q9ULK5 521 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 PSMD13Q9UNM6 376 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 CFL2Q9Y281 166 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 OR1A2Q9Y585 309 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 NPTNQ9Y639 398 aa3.02□□□□□ -1.93
BRCA1-229ENST00000621897 COL4A4P53420 1690 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PNPLA6Q8IY17 1366 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PPIAL4EA0A075B759 164 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 C1orf232A0A0U1RR37 186 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 GOLGA8IPA6NC78 632 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 WASHC1A8K0Z3 465 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 WWP2O00308 870 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ITGB1BP1O14713 200 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 BCKDKO14874 412 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ARPC1BO15143 372 aaKnown RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 STX7O15400 261 aaKnown RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 NBR2O15453 112 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ZSCAN12O43309 604 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 NDUFS6O75380 124 aaKnown RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 NEBLO76041 1014 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 CCNB2O95067 398 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 H6PDO95479 791 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 HLA-DRAP01903 254 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ERCC1P07992 297 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 FCGR3AP08637 254 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PPIAL4FP0DN26 164 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 NQO2P16083 231 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 MGMTP16455 207 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PCMT1P22061 227 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 GDF1P27539 372 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 GDI2P50395 445 aaKnown RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 TNFSF10P50591 281 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 HERV-K104P63124 156 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 TNNC1P63316 161 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PAX2Q02962 417 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 PJVKQ0ZLH3 352 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 BST2Q10589 180 aaKnown RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 CDH17Q12864 832 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 MESDQ14696 234 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 P2RY14Q15391 338 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 C18orf21Q32NC0 220 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 C9orf129Q5T035 196 aaKnown RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 GPR157Q5UAW9 335 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 ZNF470Q6ECI4 717 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 HIST2H2AA3Q6FI13 130 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 RHBDD2Q6NTF9 364 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 H3F3CQ6NXT2 135 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 SCYL2Q6P3W7 929 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 TMIGD1Q6UXZ0 262 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 WASH2PQ6VEQ5 465 aa3.01□□□□□ -1.93
BRCA1-229ENST00000621897 USP50Q70EL3 339 aaPredicted RBP3.01□□□□□ -1.93
BRCA1-229ENST00000621897 NLRP9Q7RTR0 991 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms