RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 LCN6P62502 163 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CSNK2A1P68400 391 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PAFAH1B3Q15102 231 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CSNK2A3Q8NEV1 391 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SLC32A1Q9H598 525 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CLMPQ9H6B4 373 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NLE1Q9NVX2 485 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PI3P19957 117 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 HERV-K104P61576 105 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 B2MP61769 119 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SPIN4Q56A73 249 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 LSRQ86X29 649 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM99Q8N816 258 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 EDEM2Q9BV94 578 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SIRT3Q9NTG7 399 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RHBDD3Q9Y3P4 386 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ASB1Q9Y576 335 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ANKRD12Q6UB98 2062 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SETBP1Q9Y6X0 1596 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CHD4Q14839 1912 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PRKRAO75569 313 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CNR1P21554 472 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RFC3P40938 356 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RPL23AP62750 156 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CDC42EP1Q00587 391 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ITPRIPL2Q3MIP1 535 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF385CQ66K41 422 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NANOGP1Q8N7R0 232 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RBP7Q96R05 134 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ADAM19Q9H013 955 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GPR160Q9UJ42 338 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GOLT1BQ9Y3E0 138 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 BACE2Q9Y5Z0 518 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 DVL1O14640 695 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RCBTB2O95199 551 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 KCNK5O95279 499 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ERCC1P07992 297 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RPA2P15927 270 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PSMD8P48556 350 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GSK3AP49840 483 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CLEC14AQ86T13 490 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 CXorf40AQ8TE69 158 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 APH1BQ8WW43 257 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SAT2Q96F10 170 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 WFIKKN1Q96NZ8 548 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SMOQ99835 787 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 LUZP4Q9P127 313 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SLC23A2Q9UGH3 650 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 IER3IP1Q9Y5U9 82 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ENPP4Q9Y6X5 453 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 KAT7O95251 611 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 S100GP29377 79 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF84P51523 738 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ELLP55199 621 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SELENOWP63302 87 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ACKR1Q16570 336 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 MS4A13Q5J8X5 152 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF322Q6U7Q0 402 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 TMEM86AQ8N2M4 240 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 OR1F2PQ96R84 312 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ANKRD19PQ9H560 264 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 C1GALT1Q9NS00 363 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 C20orf202A1L168 122 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 LINC00862A6NCI5 91 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 AGAP14A8MT82 685 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 TSPAN12O95859 305 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PLGP00747 810 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ITGB2P05107 769 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 WASP42768 502 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 IGSF8Q969P0 613 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 MOAP1Q96BY2 351 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ECHDC3Q96DC8 303 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 RNF215Q9Y6U7 377 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 IFNA5P01569 189 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GSG1Q2KHT4 349 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NKAIN1Q4KMZ8 207 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SLC35F3Q8IY50 421 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 KCTD12Q96CX2 325 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NIFKQ9BYG3 293 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 PADI1Q9ULC6 663 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 FAM221BA6H8Z2 402 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 KCNE1P15382 129 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SNRPD1P62314 119 aaKnown RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NR0B2Q15466 257 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 AGTRAPQ6RW13 159 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GPR137Q96N19 417 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GNG13Q9P2W3 67 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ZFP92A6NM28 416 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 B4E171 279 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 H7C4K7 107 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 NPC1O15118 1278 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SNHG28P0DPA3 235 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 EIPR1Q53HC9 387 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GDF6Q6KF10 455 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF681Q96N22 645 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 LRFN5Q96NI6 719 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 SCGB3A2Q96PL1 93 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 GPR20Q99678 358 aa4.7□□□□□ -1.66
VPS13D-214ENST00000620676 ASAH2Q9NR71 780 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms