RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 COMTD1Q86VU5 262 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PTOV1Q86YD1 416 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 P3H2Q8IVL5 708 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ZDHHC21Q8IVQ6 265 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PARP8Q8N3A8 854 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 LINC00471Q8N535 108 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FADS6Q8N9I5 356 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 GATSQ8NAP1 163 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 OR52N2Q8NGI0 321 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 RHOXF1Q8NHV9 184 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ADAMTS15Q8TE58 950 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 XAGE5Q8WWM1 108 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 MAL2Q969L2 176 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 HRASLS5Q96KN8 279 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 Q96MT0 163 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 GNRHR2Q96P88 292 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 UCN2Q96RP3 112 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 NPAS1Q99742 590 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SPOCK3Q9BQ16 436 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 DOHHQ9BU89 302 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 G6PC3Q9BUM1 346 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FUNDC2Q9BWH2 189 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 TTTY12Q9BZ98 90 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF350Q9GZX5 532 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 HOXD1Q9GZZ0 328 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SAP130Q9H0E3 1048 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 QRSL1Q9H0R6 528 aaKnown RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SLC38A1Q9H2H9 487 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 UBQLN3Q9H347 655 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 TMEM38AQ9H6F2 299 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 SP140LQ9H930 580 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF556Q9HAH1 456 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 Q9N2J8 555 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF629Q9UEG4 869 aaPredicted RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 WARS2Q9UGM6 360 aaKnown RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 FBXL2Q9UKC9 423 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 NPIPA1Q9UND3 350 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 EDARQ9UNE0 448 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 OSGIN2Q9Y236 505 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 MEMO1Q9Y316 297 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 CHST2Q9Y4C5 530 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 GMPPBQ9Y5P6 360 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 ABCA4P78363 2273 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 PDZD2O15018 2839 aa4.76□□□□□ -1.65
SHMT1-211ENST00000618902 NCOA6Q14686 2063 aaPredicted RBP4.76□□□□□ -1.65
SHMT1-211ENST00000618902 INTS1Q8N201 2190 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 PHF3Q92576 2039 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 A0A087WZY1 265 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 IGLV3-32A0A0A0MS00 114 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TRGV5A0A0B4J1U4 118 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TRGV8A0A0C4DH27 118 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 A0A1B0GVG6 124 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 A0A1W2PPW3 197 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 FUOMA2VDF0 154 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 HSPB2A8KAH6 182 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SHISA8B8ZZ34 492 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ALG1L2C9J202 215 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 E9PQ18 207 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SLC1A7O00341 560 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CCL21O00585 134 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 KIAA0513O60268 411 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZIC3O60481 467 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SEMA7AO75326 666 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 GCM2O75603 506 aaPredicted RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CLDN14O95500 239 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 KRT75O95678 551 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 IL18BPO95998 194 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 AK1P00568 194 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SERPINA1P01009 418 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SEMG1P04279 462 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CRHP06850 196 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TFPTP0C1Z6 253 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ARAFP10398 606 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CPN1P15169 458 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF182P17025 639 aaPredicted RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 RPS4Y1P22090 263 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TCEA1P23193 301 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 IL12BP29460 328 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 S100A5P33763 92 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 MAGEA5P43359 124 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 KHKP50053 298 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 BCAP31P51572 246 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CRYBA2P53672 197 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 MTPNP58546 118 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 B3GALT5-AS1P59052 145 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 IL5RAQ01344 420 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 PLGLB1Q02325 96 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 EMX1Q04741 257 aaPredicted RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CD47Q08722 323 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 NPRL3Q12980 569 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 OXA1LQ15070 435 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 RGNQ15493 299 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 NPTX1Q15818 432 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 NEDD8Q15843 81 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 HSPB2Q16082 182 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CTF1Q16619 201 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 NDUFA5Q16718 116 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZSWIM7Q19AV6 140 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF630Q2M218 657 aaPredicted RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF181Q2M3W8 571 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms