RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TUBA3EQ6PEY2 450 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 CCBE1Q6UXH8 406 aaPredicted RBP11.36□□□□□ -0.59
CIITA-212ENST00000618207 MARCH3Q86UD3 253 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 CELF2-AS1Q8N7Q2 184 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 C17orf47Q8NEP4 570 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 CCDC74AQ96AQ1 378 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 MOGAT1Q96PD6 335 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ELF4Q99607 663 aaPredicted RBP11.36□□□□□ -0.59
CIITA-212ENST00000618207 TIMP4Q99727 224 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ZNF426Q9BUY5 554 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 MIXL1Q9H2W2 232 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 PRO3102Q9H379 93 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 UCK1Q9HA47 277 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 UBQLN4Q9NRR5 601 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 ASB6Q9NWX5 421 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 BABAM2Q9NXR7 383 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 EPHA6Q9UF33 1036 aa11.36□□□□□ -0.59
CIITA-212ENST00000618207 FREM2Q5SZK8 3169 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 A0A075B6Q4 140 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 A0A087WUJ7 227 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 A0A1W2PRG6 482 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 CCDC182A6NF36 153 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 FABP12A6NFH5 140 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 SLC22A31A6NKX4 558 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 FAM25EA8MYX2 175 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 DYRK3O43781 588 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 NUDT21O43809 227 aaKnown RBP11.35□□□□□ -0.59
CIITA-212ENST00000618207 SCO2O43819 266 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 HPGDSO60760 199 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 NDUFB2O95178 105 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 HLA-DPB1P04440 258 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 GLB1P16278 677 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 RORAP35398 523 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 IL20RBQ6UXL0 311 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 GDPD3Q7L5L3 318 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 C7orf57Q8NEG2 295 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 PPIL3Q9H2H8 161 aaKnown RBP11.35□□□□□ -0.59
CIITA-212ENST00000618207 ADGRL4Q9HBW9 690 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 SERTAD3Q9UJW9 196 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 V9GYH0 126 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 SDK2Q58EX2 2172 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 K7ESF4 209 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 TFECO14948 347 aaPredicted RBP11.35□□□□□ -0.59
CIITA-212ENST00000618207 RNF13O43567 381 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 SHC1P29353 583 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 IL12BP29460 328 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 GPR143P51810 404 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 KLHL26Q53HC5 615 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 FAM69BQ5VUD6 431 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 RPL13AP3Q6NVV1 102 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 TMEM91Q6ZNR0 172 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 SYT9Q86SS6 491 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 OR5J2Q8NH18 312 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 OR5W2Q8NH69 310 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 ADAMTS18Q8TE60 1221 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 PMEPA1Q969W9 287 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 Q96M85 177 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 NEDD4LQ96PU5 975 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 VN1R1Q9GZP7 353 aa11.35□□□□□ -0.59
CIITA-212ENST00000618207 ADAMTS9Q9P2N4 1935 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 FITM1A5D6W6 292 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 NOTOA8MTQ0 251 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 H3BMH7 237 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 H3BSH0 61 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 DDAH2O95865 285 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 EIF2B2P49770 351 aaKnown RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 RAB15P59190 212 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 NDUFA5Q16718 116 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 PYDC2Q56P42 97 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 GUSBP11Q6P575 273 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 VASH1Q7L8A9 365 aaPredicted RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 C9orf40Q8IXQ3 194 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 OR52N1Q8NH53 320 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 ZNF721Q8TF20 911 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 LCORQ96JN0 433 aaPredicted RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 CLEC4AQ9UMR7 237 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 EFCAB7A8K855 629 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 ZNF264O43296 627 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 GDF9O60383 454 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 SELENOFO60613 162 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 IFNGP01579 166 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 TFP02787 698 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 MST1P26927 711 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 PSMB10P40306 273 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 RPS27P42677 84 aaKnown RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 PPICP45877 212 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 RPS5P46782 204 aaKnown RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 ARRB1P49407 418 aaPredicted RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 PSMD4P55036 377 aaKnown RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 ZNF85Q03923 595 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 GALEQ14376 348 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 ARMC4Q5T2S8 1044 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 IDNKQ5T6J7 187 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 C1QL3Q5VWW1 255 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 ARHGAP11AQ6P4F7 1023 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 NRARPQ7Z6K4 114 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 ZNF527Q8NB42 609 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 SLC38A9Q8NBW4 561 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 LILRB1Q8NHL6 650 aaPredicted RBP11.34□□□□□ -0.59
CIITA-212ENST00000618207 PMM1Q92871 262 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms